KEGG   Arabidopsis lyrata (lyrate rockcress): 9318843
Entry
9318843           CDS       T01578                                 
Name
(RefSeq) protein ELC
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03250  Viral life cycle - HIV-1
aly03272  Virion - Hepatitis viruses
aly04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    9318843
   03272 Virion - Hepatitis viruses
    9318843
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    9318843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9318843
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9318843
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    9318843
Exosome [BR:aly04147]
 Exosomal proteins
  Proteins found in most exosomes
   9318843
SSDB
Motif
Pfam: UEV Vps23_core UQ_con NDC80_loop Init_tRNA_PT
Other DBs
NCBI-GeneID: 9318843
NCBI-ProteinID: XP_002884901
UniProt: D7KZS2
LinkDB
Position
Unknown
AA seq 397 aa
MVPSPSNPQQIQQFLSSALSQRGPSSVPYEESNKWLIRQHLLNLISSYPSLEPKTASFMH
NDGRSVNLLQADGTIPMPFHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHV
TPSGLVSLPYLQNWVFPSSNLVDLVSDLSAAFARDPPLYSRRRPQPPPPSPPTGYDSSLT
RPPSADQSLARPFPPSPYGGGGRVQVQHVHHQQQSDDAAEVFKRNAINKMVEMVHGDLVS
MRRAREAEAEELLSLQAGLKRREEELNRGLREMVEEKETLEQQLQVISMNTDILDSWVRE
NQGKTKNLVDLDVDNAFECGDTLSKQMLECTALDLAIEDAIYSLDKSFQDGVVPFDQYLR
NVRLLSREQFFHRATGSKVRAAQMEVQVAAIAGRLHS
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggttccttcgccgtcgaatccgcagcagattcagcagttcctctcttccgcgctctcc
cagcgcggtccatcttcagttccctacgaagagtccaacaagtggttgatccggcaacat
ctacttaacctaatctcttcttacccttccttagagcccaaaacggcatcgtttatgcac
aacgatggccgctccgtcaatctccttcaagcagatggtacgatcccgatgcctttccat
ggagtcacctataacatccctgtaatcatctggctcctcgaatcttatcctcgccatcct
ccttgcgtctatgtgaatcctaccgccgatatgatcataaagcgacctcacgcacatgtt
actccttctggtctcgtttctcttccttatcttcagaattgggttttccctagctcaaat
ctcgtagatcttgtctccgatctcagcgctgcttttgctcgtgatccgcctctttattca
cgacgccgtcctcagccgccgccaccgtctcctcctactggatacgattcgtctctgaca
cgacctccttctgctgatcagtcattagctagaccgttcccgccatcaccttacggtgga
ggaggtagggtgcaagtgcagcatgttcaccaccagcagcaatcggatgatgctgcggag
gttttcaagagaaacgcgattaataagatggtggagatggttcacggcgatttggtttcg
atgaggagagccagagaagctgaagcagaggagctactgagtttgcaagctgggctgaag
agaagagaggaagagcttaatagaggtttgagagagatggttgaggagaaagaaacactt
gaacaacaattacaggttatctccatgaacactgatattctagactcttgggttagagag
aaccaaggcaaaaccaagaatttagttgatttggatgtggataatgcttttgaatgtggt
gacacactctctaagcagatgttagagtgtactgctttggatttagccattgaagatgct
atttattccttggataaatcgtttcaagatggggttgttccctttgatcagtacttgagg
aatgtaaggttgttgtcgagggaacagttcttccaccgtgccacgggttctaaagtcagg
gcggcacagatggaggttcaggttgcagcgatcgcaggtaggttgcattcatga

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