Arabidopsis lyrata (lyrate rockcress): 9318892
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Entry
9318892 CDS
T01578
Name
(RefSeq) TATA-box-binding protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
9318892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9318892
03021 Transcription machinery [BR:
aly03021
]
9318892
Transcription factors [BR:
aly03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
9318892
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
9318892
RNA polymerase III system
TFIIIB
9318892
RNA polymerase I system
SL1/TIF-1B
9318892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
9318892
NCBI-ProteinID:
XP_020888094
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MADQGLEGSTPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEYFSKMAARKYARIVQKLGFSAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMREE
TYRAFENIYPVLTEFRKIQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaaggattggaagggagtactccagtggaccttagcaagcatccttcaggg
attgttcctactcttcaaaacattgtctccacggtgaacctagactgcaagctagatctt
aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgctgtt
ataatgaggatcagagaaccgaagactacagcattgatattcgcctcagggaaaatggtc
tgtactggagcgaagagcgagtacttttcgaagatggctgcccgaaagtatgctaggatt
gtgcagaaattgggattctctgcaaaattcaaggatttcaagattcagaatatcgtaggt
tcttgtgatgtcaaattccctataagacttgaaggtcttgcttactctcacgctgctttc
tcaagttatgagcccgagctcttcccagggctgatttataggatgaaagtgcctaaaatc
gtccttctaatctttgtctctgggaagatcgttataacgggagccaagatgagagaggag
acttacagagcctttgagaatatataccccgtgctcacggaattcagaaagatacagcaa
tag
DBGET
integrated database retrieval system