KEGG   Arabidopsis lyrata (lyrate rockcress): 9318892
Entry
9318892           CDS       T01578                                 
Name
(RefSeq) TATA-box-binding protein 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    9318892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aly03000]
    9318892
   03021 Transcription machinery [BR:aly03021]
    9318892
Transcription factors [BR:aly03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    9318892
Transcription machinery [BR:aly03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     9318892
  RNA polymerase III system
    TFIIIB
     9318892
  RNA polymerase I system
    SL1/TIF-1B
     9318892
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 9318892
NCBI-ProteinID: XP_020888094
LinkDB
Position
Unknown
AA seq 200 aa
MADQGLEGSTPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEYFSKMAARKYARIVQKLGFSAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMREE
TYRAFENIYPVLTEFRKIQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggctgatcaaggattggaagggagtactccagtggaccttagcaagcatccttcaggg
attgttcctactcttcaaaacattgtctccacggtgaacctagactgcaagctagatctt
aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgctgtt
ataatgaggatcagagaaccgaagactacagcattgatattcgcctcagggaaaatggtc
tgtactggagcgaagagcgagtacttttcgaagatggctgcccgaaagtatgctaggatt
gtgcagaaattgggattctctgcaaaattcaaggatttcaagattcagaatatcgtaggt
tcttgtgatgtcaaattccctataagacttgaaggtcttgcttactctcacgctgctttc
tcaagttatgagcccgagctcttcccagggctgatttataggatgaaagtgcctaaaatc
gtccttctaatctttgtctctgggaagatcgttataacgggagccaagatgagagaggag
acttacagagcctttgagaatatataccccgtgctcacggaattcagaaagatacagcaa
tag

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