KEGG   Arabidopsis lyrata (lyrate rockcress): 9318955
Entry
9318955           CDS       T01578                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9318955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aly03041]
    9318955
   04121 Ubiquitin system [BR:aly04121]
    9318955
Spliceosome [BR:aly03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    9318955
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    9318955
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    9318955
SSDB
Motif
Pfam: SART-1 ODAD1_CC
Other DBs
NCBI-GeneID: 9318955
NCBI-ProteinID: XP_002882889
UniProt: D7L365
LinkDB
Position
Unknown
AA seq 197 aa
MKKDSVRKNKKLVINIALDKEVLASRLEADHDLGSLRDEKERFESSERRRDVVCSKAEDI
FDKATNDHSSVRGDGIMREVDVGTGLSGALNRLREQGTFKEESKIVGVKDNHEDDRFKDR
FKDIEIQRVDKWGRILTEKEAYRSLCHRFHGKGPGKKKQEKQRKKHEDKSKQMESSERAV
ERIREVHAISKSPYIVL
NT seq 594 nt   +upstreamnt  +downstreamnt
atgaagaaggattctgtgaggaagaataagaaactcgttataaatattgctctagataaa
gaagttcttgcttcgcgattagaagctgatcatgatcttggttctctaagagatgagaaa
gagaggtttgaatcatcagagagaagaagagatgtggtttgttccaaagctgaagatatt
tttgataaggcaactaatgatcattctagtgttagaggagatgggatcatgcgggaggtt
gatgtcggaacaggattatcgggcgcgttaaaccgtctgagagagcaaggaactttcaag
gaggaaagcaagattgtaggtgttaaggacaatcatgaagatgacagattcaaagataga
tttaaggatatagagattcagagggtggacaagtggggaaggatattgactgagaaggaa
gcgtatcggtcactgtgtcatagattccatgggaaggggcctgggaagaagaagcaagag
aaacagaggaagaagcatgaagataagtcaaaacagatggaatcttcagagagagctgtg
gaaagaattagagaagttcatgccatatccaagagtccttacattgttctctaa

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