Arabidopsis lyrata (lyrate rockcress): 9319095
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Entry
9319095 CDS
T01578
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9319095
03009 Ribosome biogenesis [BR:
aly03009
]
9319095
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
9319095
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
9319095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
Trp_halogenase
Motif
Other DBs
NCBI-GeneID:
9319095
NCBI-ProteinID:
XP_002885165
UniProt:
D7L673
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MSSKSTKRKVTETFDSLKSKKPKLVSGEQQQQQHGKPKFVKPKSFGDSLSKKERRVQAKE
LTEARKKKRKPHYNLEQELASLWEKMRRRDIGKEDRSKLISEAIRKMKGKVPEIAVSHVS
SRVLQTCVKFCSQAEKDALFAELQPQFLNLASNKYAVHFIQKMLDGASKQQLAACIFSLR
GHVAPLLRHLFGSVVVEHAYRLGTAAQKQELLAELYSTELQLFKGLTSSTEKTVVDIIAK
LGLQKGAVNRHMTAIIQPILEKGIVDHTITHKLLIEYLTIADKTSAADVLQLLTGSLLLR
MVHTRDGSRLAMLSIKHGSAKERKKIIKAMKEHVTKMGFYQFGSMVLACIFSIVDDTKLV
TKIIVRELEASLKDLVMDKNGRRPLLQLLHPNSSRYLSHDDLAALDLSVPSLCSMDKSDT
SSKTKDTDGNESGEETKDEQDDTVAEHTDHEENVTAMGGKKDPLVRRQELLVNSGLAERL
IDVCVENAEEFLKSNFGKEVMYEVAIGGSDGILCPSLSEKLYELYEAISSVAAKPKPQES
GKDSEHILENFHSSRTIRRLVLDCPGFASTLFKKALSGKCRSWAQGHCSKILSAFLETED
FQVREMAKTELQVLVSEGTLKISAAKKPE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaaatcgaccaagaggaaggttactgaaacattcgattctctaaaatcgaag
aagccaaagctggtgtctggagaacaacaacaacaacaacatgggaaacctaaatttgtt
aaacccaaatcttttggagacagtctatcgaagaaggagcgtcgtgtacaggctaaggag
ctaacagaagctaggaagaagaagaggaagccacattacaatcttgagcaagagcttgca
tctctatgggagaagatgaggcgtcgtgatattggcaaggaggaccgatcaaagctgatt
tctgaagctataaggaagatgaaggggaaggttccagagattgcagtctcacatgtttca
tcccgtgtactccagacttgtgtgaagttttgctcacaagctgaaaaagatgctctcttc
gccgaactccagccacagtttcttaaccttgcttctaataaatatgctgttcattttata
cagaagatgttggatggagcatctaagcagcagctggcagcttgtatattcagcctccgg
ggacatgttgctcctcttctccgtcacctgtttggatctgttgttgtggagcatgcatac
cgtctgggaactgctgcacaaaaacaagaactccttgcagaattgtattctacagagctt
cagttattcaagggcttgacctcatctaccgaaaaaacggtggtagacatcatcgctaag
ctaggactgcaaaaaggtgctgttaaccgacacatgactgccattatccaaccgattctt
gagaagggaattgtcgaccacactatcacacacaaattgctgattgaatacctgacaata
gctgataagacttctgctgcagatgtgcttcagctactgacaggctcccttcttttgcgt
atggttcatacccgtgatggttctaggcttgccatgctttctatcaaacatggaagcgcc
aaggagagaaagaagattatcaaagcaatgaaagagcatgttacaaagatgggtttttat
cagtttggaagtatggtgcttgcatgtattttttcaatagttgatgacacaaagctcgtg
accaagataattgttcgtgagctcgaggccagcctaaaggatcttgttatggacaagaat
ggtaggagaccgctattgcagctactgcatccaaattcttcacgttatttgagccatgat
gatttggccgctcttgatctttctgttccatcactctgctcaatggataagtcagacaca
tcctctaaaacaaaggacacagatggtaacgaatctggtgaggagacgaaggatgaacaa
gacgatacagtagctgaacatacagatcatgaagaaaacgtcacagctatgggcggtaaa
aaagatccccttgtgagaagacaggagttgctcgtcaacagtggccttgctgagaggctt
attgatgtgtgcgtggaaaatgccgaggaattcctcaagtccaactttggcaaagaggtc
atgtatgaggttgccatcggaggctccgatggtattctttgcccatctctgagcgagaag
ctgtatgagctgtacgaagctattagctctgtagcagcaaaaccgaaaccccaagaatct
gggaaggattcagagcacatcctggaaaactttcactcaagtcggaccataagaaggctt
gtcttggattgccctggtttcgcatccactctctttaagaaggccttgtctggaaaatgt
cggtcgtgggctcaaggacactgttcaaagatactatctgctttcctagagactgaagat
tttcaagttcgtgagatggctaaaacagagcttcaggtgttggtgagtgaaggtactctg
aaaatctcagcagccaagaaacctgaatga
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