Arabidopsis lyrata (lyrate rockcress): 9319096
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Entry
9319096 CDS
T01578
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13 isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9319096
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
9319096
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Helicases
9319096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
AAA_22
Rcc01698_C
Motif
Other DBs
NCBI-GeneID:
9319096
NCBI-ProteinID:
XP_020889101
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MVAGGKESSSMAKKNKRSHKRKREEDFERIDSLPWSSSIPIGEDDEGETFSTLFSGSGQL
DGGFLSLEEIDEADYHLALPTVENGITERKQAQEDDDVTNETVDEIIEGEGEEEDGEEME
DEDDSESRKIREKKTKKNKEKKKEKKKKKQKKIKEAEKDQDTSDAVSCDDDYKVEEQVEG
EEIPPEFSAWGLMRLHPLLMKSIYHLGFKQPTEIQKACFSIAAYQGKDVIGAAETGSGKT
LAFGLPILQRLLDEREKVGKLYALKGEKAQKYAADGYLRALIITPTRELALQVTDHLKNA
AENLNVKVVPIVGGMSSAKQERLLKGKPEIVVGTPGRLWELMSAGEKHLVELHSLSFFVL
DEADRMVESGHFRELQSIIDLLPVTDRPNEGKMQTVQSSDTVSNAPKKKRQTFVFSATIA
LSSDFRKKLKRGSSKSKPSSSGEVNSIEVLSERAGMRDSVAIIDLTTASILAPKIEESFI
KCEEEEKDAYLYYILSVHGQGRTIVFCTSVAALRHICALLKILGLDVCKLYSDMKQRARL
KAIDRFRASENGILIATDVAARGIDIKNVRTVIHYQLPHSAEVYVHRSGRTARAFADGCS
IALIAPSDSSKFYMLCKSFSKETVKIFPLDSSYMPAVRKRLSLARQIDQIERKGSREKAD
RTWLEKHAESMELELDDDESEEERVDNVRQRKATSAQLNKLQEELSSLLSRPMQPKKFSG
RYFAGAGVSTLMQNQFIELSKQKQLQMQTGGKKKRRKLVVINQNCIEPLQALRAGGNEMM
KMKGQSADKRRDIASLRKKRKEEKIGRRDQRRDQKKKRKLMASS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaggcggcaaagaatcttcctcaatggcgaagaagaacaagagaagccataag
agaaaacgagaggaggatttcgaacgcatagattcacttccgtggagctcttcaatacct
atcggagaagacgacgaaggcgaaaccttctccactctattttcaggctcaggccagctc
gacggaggttttctttcacttgaggagattgatgaagctgattaccatctagctcttcct
acggttgaaaatggaataacagagagaaaacaagctcaagaagacgatgatgttaccaac
gagactgttgatgagataattgaaggcgaaggagaagaagaagatggagaagaaatggaa
gacgaggatgactctgagagtcgtaagataagagagaagaaaactaagaagaataaggag
aagaaaaaggagaagaagaagaagaaacagaagaagattaaggaggctgaaaaggatcag
gacacttctgatgcagttagctgtgatgatgattacaaagtagaggagcaagttgaggga
gaagagattcctccggaatttagtgcatggggtttgatgagactccatccactactcatg
aagtcaatataccaccttggattcaagcagccgacagaaattcagaaggcttgtttttcc
attgcagcatatcagggaaaggatgttattggtgctgcggagacaggatctggaaagact
cttgcttttgggttgcccatactgcaacgcctcttagacgaacgggaaaaggttggtaaa
ttgtatgcattgaagggagaaaaagcacagaagtatgctgcagatggctatttacgagct
ctaatcatcactccaactagggaacttgctcttcaggtgacggatcatcttaagaatgct
gccgagaatctcaatgtcaaggtcgttcctattgttggtgggatgtcatcagcgaagcag
gaaagacttttgaaagggaaacctgaaatagttgttggaactccaggaaggttgtgggaa
cttatgtccgctggagaaaagcatcttgtagagctgcattccttatcgttttttgtgttg
gacgaggctgatcgcatggttgaaagtggtcatttcagggagctgcagtctataattgac
ttgcttccggtgacagatagaccaaatgaagggaaaatgcaaactgtgcagagtagtgac
acagtttccaatgccccgaagaagaaaagacaaacttttgttttctcagctaccatagcg
ctgtcttcggatttccgtaaaaagctaaagcgtggctcctcgaagtcaaagccatcatca
tctggtgaagtgaattctattgaggttttatctgaacgagctggaatgagagatagtgtt
gccatcattgatctgacaactgcatctattttggcaccaaagattgaagaatcttttatt
aagtgcgaagaggaggaaaaagatgcttacttgtattatattttgagcgtccatggacaa
gggcgtacaattgttttctgtacatcagtggcagctttgcggcatatctgtgcgctttta
aagattcttggactcgatgtttgcaaactctactcagatatgaagcagcgagctcggttg
aaggcaatcgaccgtttccgtgcaagcgaaaatggcatactcatagcaacagatgttgca
gcaaggggtattgatattaagaatgtccgaactgttattcactaccaacttccacattcg
gcagaagtatatgtacatagaagtgggaggactgctagagcattcgcagatggatgcagt
atagctttgattgcgccaagtgattcgtccaagttttacatgttatgcaagtcattctct
aaggaaaccgtaaagatattccctttggatagctcttatatgccagctgtgaggaagcga
ttatctctagcacgtcaaatagaccagattgagcggaaaggctcacgggagaaagcagac
aggacctggcttgaaaagcatgctgaatcgatggaactcgaattggacgatgacgaaagt
gaagaggaaagagtggacaatgtcaggcagagaaaagcgacctcagcacaacttaataag
ctgcaggaggaacttagctcgctcttatcacgtccgatgcagcccaagaaattttcaggc
cgttactttgctggagctggtgtgtcgactcttatgcagaatcagtttatagagttatcg
aaacaaaaacaactacaaatgcaaactggtggaaagaaaaagagaagaaaacttgttgtc
attaaccagaactgcatcgaacctcttcaagcccttcgtgctggtggtaacgagatgatg
aaaatgaaaggtcagagtgcagacaagaggcgcgatatagcgagcttgaggaagaagaga
aaggaagagaagataggtcggcgtgatcagcgaagggaccagaagaaaaagagaaaacta
atggcttcttcttaa
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integrated database retrieval system
