Arabidopsis lyrata (lyrate rockcress): 9319119
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Entry
9319119 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9319119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9319119
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
9319119
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
HECT type E3
9319119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
9319119
NCBI-ProteinID:
XP_020889090
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSTKERDARKLLEQTRMERNRRLLQKQQNSAALKIQKFFRGRR
SMAIERSKVRHDFCETYGNNCQNVDRHCFEPGSSFLRQFLFFFKAQNSGDFVILVETCRL
LQSFVDSSGDIVSLFSGLDYSSKHNLVDFRVKKLAFTCIEAIHQNRNRLRDQLLVTPEEA
SISTAILMEAVSLLLDPKLPWVCKIVSYLHKENVFKLVREMVTTAKESSRGQTMTGSILS
LERVLTLIVPHIGREPCCCPVVDPRCSFSSMILTIPLIWKLFPNLKVVFANPSLSQHYIH
QMASCIQKDTCVLPMETSPEFPGYACLLGNTLDTANVVLSQPECSLDMAIDIALVATFLL
ETLPPVKSSEKESRQSSSDEDDMLIDDVPELVLNRALEHQITNAIDSRFLLQLTNVLFHQ
VSLGTQSYDEDKEALAIGTASSFLYAAFNTLPLERIMTILAYRTELVAVLWNYMKRCHEN
QKWSSMPKLLAYLPGDAPGWLLPLVVFCPVYKHMLMIVDNEEFYEREKPLSLQDIRLLII
ILKQALWQLLWVNPLTQPNTGKSVSNDLSKKNPVELIQNRVGVVVSELLSQLQDWNNRQQ
FTSSSDFQADTVNEYFISQAIVEGTRANYILMQAPFLIPFTSRVKIFTTQLATARQSHGS
QGIFARNRFRIRRDHILEDAYNQMSALSEDDLRGSIRVTFVNELGVEEAGIDGGGIFKDF
MEKITRAAFDVQYGLFKETADHMLYPNPGSGMIHDQHLQFFHFLGSLLAKAMFEGILVDI
PFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDLELYFVILNNEYGERTE
EELLPGGQDMRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPKEWIDMFNEHE
LQVLISGSVDSLDIDDLRNNTNYAGGYHAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCS
RGPLLGFKYLEPAFCIQRAAGSASNESVDRLPTSATCMNLLKLPPYQSKELLETKLMYAI
SAEAGFDLS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggcgatccgtcgactcggaagcgagttgatttaggtggccggagcacc
aaggaaagagatgctcggaagcttctggagcagactagaatggagcgtaatcgtcgcttg
ctacagaagcagcagaactctgctgctctcaaaattcagaaattctttagaggtcgacga
tcaatggccattgagcgctcgaaggtgcggcatgatttctgtgaaacctatgggaataat
tgccagaatgtcgatagacattgctttgagccaggctcaagtttcctccggcagtttctg
ttttttttcaaggcacaaaactcgggagattttgtgatacttgtggagacttgtcgtcta
ctgcagagtttcgttgacagcagtggtgacattgtcagccttttttctggcttggactat
tcctctaagcataatttggtggattttagagtaaagaaacttgcatttacctgtattgaa
gctatacaccagaataggaaccgtttaagggatcagctcttagttactcctgaagaagct
agcatttcaacagctatcttgatggaggcagtgtcgttgttgctagatcctaagctgcct
tgggtctgcaaaatagttagttatctacataaagagaacgtattcaaactggtgcgagaa
atggtcactacggctaaggaaagctcaagaggtcagacaatgaccggcagcatcctttca
ctagaaagagtcttgacactgatagtaccacatattggccgtgagccatgttgctgccct
gttgttgatccacgttgtagtttctcatctatgattcttacaatacctttgatatggaag
ctcttcccaaacttgaaagtggtctttgccaacccaagtctaagtcaacactacattcac
cagatggcttcctgtattcaaaaggatacctgtgttctcccaatggaaacaagcccagaa
ttccctggttatgcttgcctgcttggtaatacgttggacactgcaaatgtggtgttgtca
cagcctgaatgttcattagacatggcaattgacattgcattagttgcaactttcttattg
gagacacttcctcctgtgaaatcatcagaaaaagaaagcagacagagctcttctgatgag
gatgatatgctaattgacgatgtaccagaattagtcttgaatagggcacttgagcaccag
ataaccaatgctatagactcacgttttcttctgcagttaacaaatgttttgttccatcaa
gtttcgcttggtacgcagtcatatgacgaagataaagaagcattagctattggcacagcc
agttcttttctgtatgcagcattcaacactctccctcttgagcggatcatgacaattttg
gcttataggaccgagcttgtagctgtgttgtggaattatatgaaacgatgccatgagaac
cagaagtggtcatccatgcctaaactcctagcttaccttccaggggatgctccgggttgg
ctattacctctggttgttttttgtcctgtttataagcatatgcttatgatagtcgacaat
gaggagttttatgaacgagagaagccattatcgctacaagatatcaggttgctcatcatt
attcttaagcaagctttatggcagttattatgggtaaatccacttacgcaacctaacact
gggaaatctgtctccaatgacctctcgaagaagaaccctgttgaattgattcagaacagg
gttggggttgtagtctctgagttactttcacagctgcaagattggaacaaccggcaacaa
ttcacttcctcgagtgacttccaagctgatacagtcaatgaatatttcatctctcaggcc
atagtggaaggaacgagagccaactacatactgatgcaagctccgttcttgattccgttt
acaagcagagtcaaaatattcacaacacaattagcaacggcaaggcagagtcatggatcg
caaggaatttttgctcgaaatcggttcagaatacgaagagatcatatcttggaagatgct
tacaatcaaatgagtgcgttgtcagaggatgatctccgggggtcgattcgcgtgacattt
gtcaatgaactcggagttgaggaagctggtattgatggtggtggcattttcaaagacttc
atggagaaaattacccgagctgcctttgatgtgcaatacgggttgtttaaggagacggct
gatcatatgctttatcctaatcctgggtcaggaatgatacatgaccagcatctccagttc
tttcattttctcggcagtcttcttgcaaaagcaatgtttgaagggattctagttgatata
ccatttgcaacgtttttcctcagcaaactgaaacaaaagtacaactatttgaacgatttg
ccttctctggatcctgagttgtataggcaccttatatttctgaagcgttataagggtgat
atctcagatttggagctttactttgttattttgaataatgaatatggagagaggacagag
gaagagctacttccagggggacaagacatgcgagttacaaatgagaatgttataactttc
attcatctggtttccaatcatcggttaaattttcagatacgccagcagagttctcatttc
ttgagggggtttcagcaactcattccaaaagaatggatcgacatgttcaatgagcatgag
cttcaggttctcatatctggttcagttgacagtttggatattgacgacttgcgaaacaac
actaattatgctggaggctaccacgcgggacattatgtgatcgatatgttctgggaagtt
atgaaaagcttctcaactgaaaaccagaagaagttcttaaagtttgtgacgggctgttct
cgaggaccactgctcggtttcaaatacttggaacctgcattctgcatacagagggctgcc
ggtagtgcgagtaatgaatcagttgatagactacctacatcagccacttgtatgaatctt
cttaagcttccgccttatcaaagcaaagagctacttgagacgaagttgatgtacgccata
agcgcagaagcgggttttgatctgagctga
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integrated database retrieval system
