KEGG   Arabidopsis lyrata (lyrate rockcress): 9319136
Entry
9319136           CDS       T01578                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03082  ATP-dependent chromatin remodeling
aly03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    9319136
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    9319136
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aly01009]
    9319136
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aly03021]
    9319136
   03036 Chromosome and associated proteins [BR:aly03036]
    9319136
Protein phosphatases and associated proteins [BR:aly01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     9319136
Transcription machinery [BR:aly03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     9319136
    SWI/SNF complex
     9319136
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    9319136
   PBAF complex
    9319136
   SWI/SNF complex
    9319136
SSDB
Motif
Pfam: SNF5 GP70
Other DBs
NCBI-GeneID: 9319136
NCBI-ProteinID: XP_020889211
LinkDB
Position
Unknown
AA seq 240 aa
MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVVFAKRTV
KDLKLPSAFITQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL
NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRG
SDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEARAERHAR
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaagggtttagtgtctactggttggaaaggtcccgtcaagtttaggatgcccactgct
gaaaacttggtaccaattcgtttggacattcaattcgagggtcagcgttataaagatgct
ttcacttggaacccttcagacccggataatgaagtcgttgtctttgccaaaagaactgtt
aaagacttgaaactgccctctgcatttatcactcagattgcccaatctattcagtctcag
ctctcagactttcgggcatatgaaggacaagatatgtacactggtgaaaaaatcatacca
attaagcttgatctccgagttaaccataccctcatcaaggatcagttcttgtgggaccta
aacaattttgagagtgatcctgaggaattcgcaagaaccttgtgcaaggatttaggtgtt
gaagatcctgaagttggacctgctgttgcctttgcaataagggaacaactttacgagatt
gcaattcaaagtgtggcttcagctagggagagtcgattaagtaagaaaggccgcagagga
tctgatcatggttcggcaagcaaggcaagtggcttgtcaatggacttaatgaagttattc
agctttaagtccagtgtagttcggaaaaggaaagacttggatgtttatgaaccagttgtg
gatctgctaacaagtgaggaagttgatgcccttgaagccagggcagagaggcatgcaagg
taa

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