Arabidopsis lyrata (lyrate rockcress): 9319269
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Entry
9319269 CDS
T01578
Name
(RefSeq) vacuolar protein sorting-associated protein 9A isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9319269
Membrane trafficking [BR:
aly04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
9319269
Protein recycling
Other Rab GTPase associated proteins
9319269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
DUF6748
Motif
Other DBs
NCBI-GeneID:
9319269
NCBI-ProteinID:
XP_020886418
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MENTDVFLGLHDFLERMRKPSAGDFVKSIKSLCCSFIVSFSNNAPDPEKDCATVQEFFSK
MEAAFRAHPLWSGCSEEELDSAGDGLEKYVMTKLFTRVFASNTEEVIADEKLFQKMSLVQ
QFISPENLDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIA
SNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESF
ISNIDAKSLSLDEAEFEKNMESARARISGLGSQSYQTGHGTAPPPRDESTLQKTQSLNPK
RENTLFQSKSSDSLSGTNEILNINSETPMKKAESISDLENKGATLLKDTEPSKVFQEYPY
LFASAGDLRIGDVEDLLNNYKQLVFKYVCLTKGLGDATSLAPSSSPLQALSGFDTYKESE
DHTTSSSDVQMTRETDSSVDDLIRALQGEGEDVNNLSDVKHEEYGAMLVERKDEERDPKM
LGEADAKDTDLIKHIPKRESENSSSRPAEDEDVGSKHPVAEASE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacggacgtcttcttggggctgcatgattttctggaacggatgcgcaaaccc
tccgccggcgatttcgtcaaatccattaaaagtttatgttgcagtttcattgtttcattc
tcgaacaatgcaccagacccggaaaaagattgtgctactgttcaggagttcttttctaag
atggaggctgctttcagggctcatccactttggtctggttgttctgaggaggaattggac
agtgcaggagatggcctggagaagtatgttatgacaaagctatttacccgggtatttgcc
tcaaacactgaggaggttatagctgatgagaaactctttcaaaagatgtcattggttcaa
caattcatttctcctgagaatttggatatacaaccaacttttcaaaacgaatcatcatgg
ctgctagctcaaaaagagctccagaagataaacatgtacaaagcacctcgtgataagctt
gtgtgtatccttaactgttgcaaagtgataaataacttactgctaaatgcttcaattgct
tcaaacgagaatgcacctggagcagacgaatttcttcctgttttgatatatgttacaata
aaggctaaccctccacaacttcactcaaacttgttgtatatacaaagatataggcgtgaa
tctaaacttgttggtgaagctgcgtacttcttcacaaacatactctctgcagagtctttc
atctctaatattgatgcaaaatctctttcattggatgaagctgagtttgaaaagaacatg
gaatctgcacgggcacgaatttctggtttgggcagccagtcttatcaaactggtcatggc
actgcaccaccccctcgtgatgagtccactcttcagaaaactcaaagtctgaatcccaag
agggaaaacactcttttccaatcaaaatcgtctgatagtctttctgggaccaacgaaata
ctgaatataaacagtgaaacaccaatgaagaaagctgaatctatttcagatttggaaaat
aagggtgcgacgcttttgaaggataccgagccaagcaaagtctttcaagaatatccttac
ttatttgccagtgctggtgatctgaggataggagatgttgaggacttgttaaataattat
aaacagctcgttttcaaatatgtgtgccttaccaaaggattgggtgatgcaacatcttta
gctccatccagttcacccttgcaagcgttgtccggttttgatacgtataaggaatctgag
gatcatacaacatcgtcttcagatgtacaaatgacaagggaaactgacagcagtgttgat
gatttgatccgagctctacaaggtgaaggggaagatgttaataatttgtcagatgtaaaa
catgaagaatatggcgcaatgttggtagagcgaaaggatgaagaacgtgatcccaagatg
ctaggagaagcagatgccaaagatactgatttgattaagcacattcctaagagagaaagt
gagaattctagttcccgacctgcagaagatgaagatgttggttccaaacacccagttgcg
gaagcttctgagtga
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