Arabidopsis lyrata (lyrate rockcress): 9319280
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Entry
9319280 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9319280
04121 Ubiquitin system [BR:
aly04121
]
9319280
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9319280
Membrane trafficking [BR:
aly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
9319280
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9319280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Prok-RING_1
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
FAR1_N
zf-RING_10
zf-RING_4
U-box_ZFPL1
Zf_IFT144_1st
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
9319280
NCBI-ProteinID:
XP_020888183
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MSSGVNSTGSAATEPEVDKMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNP
SLNFNPNSVDSLFPMADPFSTLLPLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNP
QSDAFDPFTFLQNHLQNLRSSGTHVQFVIENHPSDLGNRMPGNFGDYFFGPGLEQLIQQL
AENDPNRYGTPPASKSAIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVF
HQDCLLPWLQLHNSCPVCRFELPTDDPDYENRTQGIQASGDGQGSVEGQQTPRFSIQLPW
PFRRQDGSGSDPGSGSGAPGASGGNLETRGEDLD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggcgtaaattcaactggctccgccgcaacagaaccggaggtcgacaagatg
ttcttctgctaccagtgcaatcgcacagtgacaatctcaatttcctcatccgctgatcct
ttttgtccaatttgtaaccaagggtttcttgaagaatacgaagaccctaaccctaatcca
tccctcaatttcaaccctaactctgttgattcccttttccccatggctgatcctttctcc
accttgctccctctcttattcggctcttccgctgcctctccttccggcattgacttgatg
agctcgagcttcttcgctccgtcgatgcaaccacaggctcgctccactcagcagaatccc
cagtctgacgcgtttgatccgtttacgtttcttcagaatcatctccagaatctgcgatct
agcggtacgcacgttcagttcgtgatcgagaatcatccttcggatctaggtaatcgtatg
cctgggaatttcggtgactacttctttggtccaggtcttgagcagctgattcagcagcta
gctgagaatgatcctaatcgttacggaactcctcctgcttccaaatccgccattgatggg
cttcctactgttaaggtaacgaaggatatgttgaaatccgagatgaaccagtgtgccgtg
tgtatggatgagtttgaggatggtagcgatgttaaacagatgccttgtaagcatgtcttt
catcaggattgcttgctcccgtggctccagttgcataactcatgtccggtttgtcgattc
gagttgcctacggatgatcctgactatgagaacaggactcaaggaattcaggcgagtggc
gatggacaaggatcggttgagggtcagcagacgccgaggtttagtatacaacttccttgg
ccgttcaggagacaagatggctctggttctgatcctggttctggctcgggagcacctggt
gccagtggaggtaatcttgagaccaggggggaagatttggattaa
DBGET
integrated database retrieval system
