Arabidopsis lyrata (lyrate rockcress): 9319336
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Entry
9319336 CDS
T01578
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
9319336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9319336
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
9319336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
9319336
NCBI-ProteinID:
XP_002885405
UniProt:
D7KZW6
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MANLPSSLSMGTPFGGPSTSAQNPSGAPANKDRNLASAEQLVLDLSNPELRENALLELSK
KRELFQDLAPLLWNSFGTIAALLQEIVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASHS
DTRMLFLKAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAERFFAVGRVLGNMVQSLVEQP
SPRLLKHIIRCYLRLSDNPRACAALASCLPDSLRDGTFSNCLREDPTARRWLQQLVHNVG
VGRVPTHQGGGFEHML
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctaccttcatctctctccatgggcacacctttcggtggacctagcacctcc
gcacaaaatccttccggagctccggccaacaaagatcggaatttggcctctgctgagcag
ttggtactcgatctcagcaatcctgaactcagagagaatgctcttctcgagctttccaag
aaaagagaattgtttcaggatctggcgcctctgttgtggaactcttttggtacaattgct
gctttgttgcaggagatagtatcaatctactctgttcttgcacctccaaatctgactcct
gctcagtccaaccgtgtttgcaactcgctcgcacttcttcagtgcgtagcatctcattct
gacacaagaatgttatttctcaaggctcatatcccattgtacctttatcccttccttaat
acaacgagtaagtcaagacctttcgaatacttgcggcttactagcttaggtgtcattggt
gcacttgtcaaggttgatgatacagaggtcattagcttcctactttcaactgaaattatt
ccgctgtgcctccgtaccatggaaatggggagtgagctgtcaaaaacagtggcaacattt
attgttcaaaagatattgttggatgatgtggggatggattacatctgcacaacagcagag
cggttttttgcagttggtcgagtgttgggcaacatggttcagtcacttgtggagcagcct
tctccgcggcttttgaagcatatcattcgttgctatctccgtctatcagacaacccaaga
gcttgtgctgcactcgcaagctgtctccctgactcgctacgagatggaacctttagcaat
tgtcttcgcgaggatccaactgcaaggaggtggctgcaacagttggttcataatgttgga
gttggtcgagtcccaacacatcaaggtggaggatttgagcacatgctttga
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