Arabidopsis lyrata (lyrate rockcress): 9319418 Help Entry 9319418           CDS       T01578                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03018   RNA degradation Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     9319418  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aly03019]     9319418 Messenger RNA biogenesis [BR:aly03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      9319418   mRNA degradation factors    5'-3' decay     Decapping complex      9319418 SSDB OrthologParalogGFIT Motif Pfam:  bVLRF1 Motif Other DBs NCBI-GeneID:  9319418 NCBI-ProteinID:  XP_020886689 LinkDB All DBs Position Unknown AA seq 782 aa AA seqDB search MERSDSRDLYNFVRASSLDKNSTLFDASQYEFFGQNLDDMEIGGLDDDGVIAPVLGHADD DEYHLFDKGEGAGLGSLSDMDDLATTFAKLNRVVTGPKHPGVIGDRGSGSFSRESSSATD WTHDAELTSWLDEQDQEAKRWSSQPQSFAHSKPLYRTSSYPQQQPQLQHYNSEPIILPES NFTSFPPSGSRSPQASPGNLHRAPSLPGGSQLTYSAPSPLSNSGFHLSGLSQGPHYGGNL ARYASCGPTLGNMVQPHWVTDPGLLHGDHSGLLHNLVQQQHQQLPPRNAIMSQHLLALQQ RQSYAQLAALQSQLYSSYPSPSRKVPFGVGEVREHKHKSSHRSRKNRGLSQQASDAASQK SESGLQFRSKHMTSEEIEGILKMQHSNSHSNDPYVNDYYHQAKLAKKSAGSKAISHFYPA QLKDHQPRSRNSSEQHPQVHVDALGKITLPSVRRPHALLEVDSSPGFNDGSGDHKGSGKH LEQEPLVAARVTIEDALGVLIDIVDIDRTLQNTRPQDGGAQLKRKRQILLEGLATALQLA DPFSKTGQKSGMTAKDDIVFLRIATLPKGRKLVTKYLQLIVPGTEIARVVCMAIFRHLRF LFGGLPSDTLAAETISNLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSSAGDG ASVVLISLLERAAEVVVVPRVMHGNSNDGLWRASFDEFFNLLTKYCRSKYETIRGQNQGS AADVLELAIKREMPAELLRASLRHTNDDQRNYLLNFGHKPSAISESASHARGGQINSESV RG NT seq 2349 nt NT seq  +upstreamnt  +downstreamnt atggagagatctgattcaagggatttgtataactttgttcgcgcttcttccttagataaa aacagtacactcttcgatgcatcacaatatgagttttttggtcagaatctggatgatatg gaaattgggggtctggacgatgatggagtgatcgctcctgttcttggacatgctgatgat gatgagtatcacttgtttgataaaggagagggggcaggtttaggatcactatccgacatg gatgatcttgcgacaactttcgcaaagttaaacagagttgttaccggacccaaacacccg ggagttattggtgatagaggatcaggatccttttcaagagagagttcttctgctaccgat tggacacatgatgcagagctcacaagctggttggacgaacaagatcaagaagctaagaga tggtcctcacagccacaatcatttgctcattcaaaacctttgtacaggacatcttcctat cctcagcagcaaccgcagctgcagcactacaatagtgaaccgataattttaccagaatca aattttacctcctttcccccgtctggtagcagatctccacaggcgtcacccggaaatctc catcgtgctccttctcttcctggtggttctcagttgacttattctgcaccttccccactg tcaaattctggttttcatctttcaggattgtcgcaagggccccactatggtggtaatttg gctagatatgcctcatgcggtcctacgcttggtaacatggtgcaacctcattgggtcact gatcctggtcttctacacggagatcattctggtttattacataatctggtgcaacagcag catcaacaattgcctcctcgaaatgctattatgtcgcaacatttgctcgccctccagcag agacaatcgtatgctcaacttgcggcgctacagtcccaactgtatagttcctatccttcg ccatcacgtaaagtcccttttggggttggtgaagttagggaacacaaacataagtcatct catagaagtcgaaagaacagaggcctctctcaacaggcgtcagacgcagctagtcagaaa agtgaaagtggactgcagtttagatcaaagcacatgacttcagaagaaatagagggtata ctcaagatgcagcattccaattcacacagcaatgatccctatgtcaatgattattaccac caagctaagcttgccaagaagtctgccggatctaaagcaatctctcacttctatcctgct cagttgaaggaccaccagcctcggtcccgtaatagttctgaacagcatccacaagttcat gtagatgctcttggtaagattacacttccttctgtccgcaggccacatgccttgctcgag gttgactcttctcctggttttaacgatggaagcggggatcataagggctcaggaaaacat ttggaacaggaacctctcgttgcagctagggttacaattgaagatgctcttggagttctt attgacatagttgacattgacagaactctccaaaacacaagaccccaggacggaggtgcc caactcaagagaaagcggcagatcctgctagaaggattagcgacagcacttcaacttgct gatccgttcagcaaaaccggtcagaaatccgggatgactgctaaggatgatattgtcttt ctacgtatagcgactctccccaagggtcgaaaattggttacaaagtatctacaacttata gttccaggtactgagattgctcgagttgtctgtatggctatattccgccacttgagattt ctgttcggcggcctgccttcagatactctagcagcagagacgatatctaatcttgccaaa gcagtcacagtttgcgttcaagccatggaccttcgagcactgagtgcttgccttgcagct gtagtttgttcttcagagcagccacctctgcgtcctattggaagttctgctggggatggt gcttcagttgtcttgatatctcttcttgagagagctgctgaagtagtggtggttcctcga gtcatgcatgggaattctaatgatggtctctggagagcctcatttgatgaattcttcaac cttcttaccaaatactgcagaagcaagtatgagacaatccgcggacagaaccaagggagt gcagcggatgttttggagctggcgataaagagggaaatgcccgctgagcttttacgtgcg agtctgcgtcacaccaatgacgaccagaggaactatttattaaactttggtcataaaccg tcggcaattagtgagtcggcgtctcatgcaaggggtggacagatcaactccgaatctgtg agaggttaa

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