Arabidopsis lyrata (lyrate rockcress): 9319457
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Entry
9319457 CDS
T01578
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9319457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9319457
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
GTPases
9319457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
EF-G_D2
GTP_EFTU_D2
SRPRB
EFG_IV
Spectrin
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
9319457
NCBI-ProteinID:
XP_002885535
UniProt:
D7L2H7
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MDDSEGRKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAI
TMKSSSISLRYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLISELRLSPMEAYTRLIRIVHEVNGIVSAYKSEKYLSDVDSI
LASPSGELSAESLELLEDDEEVTFQPQKGNVVFVCALDGWGFGIAEFANFYASKLGASAT
ALQKSLWGPRYYIPKTKMIVGKKSLSAGSKAKPMFVQFVLEPLWQVYEAALDPGGDRTVL
EKVIKSFNLSIPPRELQNKDPKNVLQSVMSRWLPLSDAVLSMAVKHLPDPIAAQAYRIPR
LVPERKIIGGDDVDSSVLAEAELVRKSIEACDSSRDSPCVVFVSKMFAIPLKMIPQDGNH
RERMNGLNDEDSKSESDECFLAFARIFSGVLRAGQRVFVITALYDPLKGESSQKYIQEAE
LHSLYLMMGQGLTPVTEVKAGNVVAIRGLGPYISKSATLSSTRNCWPLASMEFQVSPTLR
VAIEPSDPADMSALMKGLRLLNRADPFVEITVSARGEHVLAAAGEVHLERCVKDLKERFA
KVNLEVSPPLVSYRETIEGDGSNLLESLRSLSLNTSDYIEKRTPNGRCIIRVHVMKLPHA
LTKLLDENTELLGDIIGGKGSHSVKILESQNPSLGENVDPIEELKKQLIEAGVSSSSETE
KDREKCKTEWSKLLKRIWALGPREKGPNILFAPDGKRIREDGSMLVRGSPHVSQRLGFTE
DSTETPSDISETALYTEALTLESSIVSGFQLATASGPLCDEPMWGLAFTIESHLAPAEDF
ETDKPENFGIFTGQVMTAVKDACRAAVLQTNPRIVEAMYFCELNTAPEYLGPMYAVLSRR
RARVLKEEMQEGSSLFTIHTYVPVSESFGFADELRKGTSGGASALMVLSHWEMLEEDPFF
VPKTEEEIEEFGDGASVLPNTARKLINAVRRRKGLHVEEKVVQHATKQRTLARKV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggatgattctgaaggtaggaaagttaggaacatatgtatacttgcacatgtagatcac
ggtaagacgactctcgccgatcatctaattgcttcttccggtggcggtgtacttcatccg
aggcttgccgggaagcttaggttcatggactatcttgatgaagaacagaggcgtgcaatt
acgatgaagagctcttcgatttctttacggtataaggactattctttgaacctgattgat
tcccctgggcatatggatttctgtagtgaagtatcgacagctgctcgattaagtgatggg
gcgttggttttggttgatgctgttgaaggtgtacatattcagacgcatgctgtgttgcgt
caagcttggattgagaagttgactccttgcttggtgcttaataagattgatcggttgatt
tctgagttgaggttgagccctatggaagcgtatacgcgtttgattaggattgttcatgaa
gttaatgggattgtgagcgcttataagtcggagaagtatttgtcggatgttgactctata
cttgctagtccttcgggtgagttgtctgctgagagtcttgagttgttggaggatgatgaa
gaagttacttttcagcctcagaagggtaatgtggtcttcgtgtgtgctttggacgggtgg
ggtttcgggattgcagagtttgctaatttctatgcctctaagcttggagctagtgcgact
gcattgcagaaatcattatggggtcctcgttattatattcctaaaactaagatgattgta
ggcaagaagtctttaagtgcaggaagcaaggcaaaaccaatgtttgtgcagtttgtgctt
gagcctctgtggcaggtttacgaggcagcactagatcccggtggggatagaacggttctt
gagaaagttatcaaatctttcaatttgtctattccaccacgtgaacttcagaacaaggat
ccaaaaaatgtgcttcaatcagtgatgagccgttggcttcctttgtctgatgcagtcttg
tctatggctgtgaaacatctgccagaccccattgcagcacaggcatatagaatcccgcgc
ttggttccagagaggaaaattatcggtggtgatgatgttgattcaagtgtccttgcagaa
gcagagcttgttagaaaatcaattgaggcttgtgattctagccgtgacagcccttgtgtt
gtgtttgtgtcgaaaatgtttgctattcccctgaaaatgattcctcaagatggaaatcat
agggagaggatgaacggtttaaatgatgaggacagtaaaagcgagtcggatgagtgcttc
cttgcatttgctaggatctttagtggagttcttcgcgccgggcaaagagtctttgtaatt
accgccctatatgatcccctcaagggtgaatcgtctcagaagtacattcaggaagcagaa
ctgcattccctatatcttatgatggggcaaggtttaacaccagtaaccgaggtgaaagcc
ggaaatgtagtggccataagagggcttggaccatatatatcaaaaagcgcaacactttca
tctactagaaactgctggcctttagccagcatggagtttcaggtgtctcccactctaaga
gttgcgattgaaccatcggatcctgcagatatgagtgctctgatgaaaggtctaagactt
ctaaaccgagcagatccatttgtggagattacagtgtctgctagaggagaacatgtgctt
gctgctgctggagaggttcatcttgaaagatgcgttaaggatttaaaagagagatttgca
aaagtgaacctagaagtctctccacctcttgtgtcctacagggagaccattgaaggtgat
ggatctaatcttttggaaagtttgagatctctaagcttgaatacttcggattacatcgag
aagagaactccaaatggcagatgcattatcagagtacacgtcatgaaactaccgcacgcg
ctaaccaagctgcttgatgagaacactgaattgcttggtgacataattggaggtaaaggc
agtcatagcgttaagatactagaatcccaaaacccaagtctcggagaaaatgtggatccc
atcgaagaattgaagaaacagttgattgaagctggtgtttcatcaagttctgaaaccgaa
aaggatcgcgaaaaatgtaaaaccgaatggtcgaaactgctcaagagaatttgggcgctt
ggtccaagagaaaaaggtccaaacatactattcgctccagatggtaaaagaatcagagag
gatggatcaatgcttgtaagaggctctcctcatgtctctcagagacttggcttcacagaa
gattctactgagacaccttcagatatatctgaaacagcattgtacactgaagctctgact
ctcgagagcagcattgtctcgggctttcagctagcgacagcatcaggacctctatgtgat
gaaccaatgtggggattagctttcaccattgagtctcatctcgctcccgcagaagatttt
gaaacagataaacccgaaaactttggcattttcacaggacaagtcatgacagctgtcaaa
gacgcatgtagagccgccgtgcttcagacaaatccacgtatcgtcgaagcaatgtacttc
tgtgaactgaacacggcacctgagtatcttggtccaatgtatgcggttctaagcagaaga
cgagctagagtgctcaaggaagaaatgcaagaagggtcatctctgttcacaatccacacg
tacgtgcctgtttcggaaagcttcggttttgcggacgagctaagaaaaggaacgtctggt
ggtgcaagtgctctgatggttctgagccattgggaaatgctagaggaagatcccttcttc
gttcccaaaaccgaagaagaaatcgaagagtttggtgacggagcaagcgtgcttccgaac
acagcgaggaagctcatcaacgccgtacgtcgcaggaaaggattacacgttgaggagaaa
gtggttcaacacgccactaaacaaagaaccttggctcgtaaagtttga
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