Arabidopsis lyrata (lyrate rockcress): 9319466
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Entry
9319466 CDS
T01578
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
9319466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9319466
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
9319466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
VPS38
Motif
Other DBs
NCBI-GeneID:
9319466
NCBI-ProteinID:
XP_002883399
UniProt:
D7L2J5
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MVESEKTKHTCLRLEISGADPIFVKGTWHNSHFDISVTDGSSSWICNATEEEVAERAAQW
DQPVSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSHDSK
KITVGILDFLLEANIRLSEEVVNKTRSFEKMKCEAERCLAQGEKLCEEKTEFENATYAKF
LSVLNAKKAKLRALRDKGDSVRAVEEEESTDKTESFDSGRSDNEQSEEEASKKASSSKAR
GRKRAVRS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatcggagaaaacgaaacacacatgtctccgtctcgaaatctccggcgccgat
ccaattttcgtcaaaggaacttggcataactctcatttcgatatctccgtcaccgatggc
tcctcctcttggatttgcaatgcgacggaggaggaagtggcggagagagcagcacaatgg
gatcagccagtatcggagtatttagagctcgctgaacgttacttagggtttcaacagcca
aattcggtctatggattctctgatgctcttgagggatctaaacggctctcttggacgttt
gagaaggaagggactaaacttgagtggaggtggaagtgtaagccatcacatgatagtaag
aagatcactgttgggatcttggattttcttttggaggctaatataaggctaagtgaagaa
gttgtgaacaagacgagatcttttgagaagatgaaatgtgaagctgagagatgtctcgca
caaggtgaaaaactctgcgaagaaaaaacagagtttgagaatgcaacttatgcaaagttc
ctttctgtgttaaatgcaaagaaggcaaaactgagagcactaagggacaaaggagattca
gtgagagcagttgaggaggaagaatcgacagacaaaactgaaagctttgacagtggaaga
agtgacaatgagcagagcgaggaagaagcctcaaagaaggcatcaagcagcaaagcccgt
ggccgaaagagagctgtacgcagctaa
DBGET
integrated database retrieval system
