Arabidopsis lyrata (lyrate rockcress): 9319611
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Entry
9319611 CDS
T01578
Name
(RefSeq) probable pectate lyase 10
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9319611
Enzymes [BR:
aly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
9319611
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9319611
NCBI-ProteinID:
XP_002885665
UniProt:
D7L573
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MAIFSRSFLALSATLIILALCINNASTMAQETELKSHSSSNSSTANTLPNDDGAWNEHAV
KNPEEVAAMVDMTIKNSTERRRLGFFSCATGNPIDDCWRCDQNWHLRRKRLANCAIGFGR
NAVGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSF
KTIDGRGVNVAIAGGACITIQFVTNIIIHGINIHDCRRTGNAMVRSSPSHYGWRTMADGD
AISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDK
LMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAP
GNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSGAAAPASYARASSLGAKPAS
VVSMLTYSSGALRCRIGMRC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctttagcagaagcttcttagctctctcagcaactctaatcattctagcatta
tgtataaataatgcatcaacaatggctcaagaaacggagctaaaatctcatagctcgagt
aattcatcaacggctaatacgttacctaacgacgacggtgcatggaatgaacacgccgtt
aaaaacccagaagaagtagctgcaatggtcgatatgacgattaagaacagtacggagcgg
aggaggttaggattcttctcatgcgccaccggaaacccaatcgacgactgttggagatgt
gatcagaactggcatctccgacgaaagcgtctcgcgaattgcgcgatcggattcggtcgt
aacgcagtcggaggaagagatggtcgttactacgtcgtcacagatccatcagaccacgac
gcggttaatccacgaccaggaacgctccgtcacgccgtgattcaagaccgtccgttatgg
atcgtcttcaaacgcgacatggtgattactctaactcaagagctaatcatgaatagcttc
aaaacaatcgatggaagaggcgtgaacgttgcaatcgccggcggtgcttgtatcacgatc
cagtttgtgacgaatattatcatccatgggattaatatacatgattgtagaaggactggt
aatgctatggttcgaagctcgccgtcgcattatgggtggaggactatggcggatggtgat
gctatatcgatttttggatcgagtcatatttggattgatcataattctttgtctaattgt
gctgatggattgattgatgcgattatgggatctactgctattactatctccaataactat
atgactcaccacaacgaggttatgttgatggggcatagtgattcatacaccagagacaag
ttgatgcaagtgacaatagcatataaccattttggggaagggcttatacagagaatgccg
aggtgtagacatggttatttccatgttgtaaacaatgattatactcattgggtaatgtat
gcaattggtggaagtgctaaccctaccatcaatagccaaggcaatcggttccttgccccg
ggaaacccttttgccaaagaggtgacaaagagggtaggttcatggcaaggagaatggaag
caatggaactggagatcacagggagacctaatgctcaacggtgcctacttcactaaatct
ggagctgctgctcctgcaagctatgccagagcctctagtttgggagctaaaccagcttcc
gttgtaagtatgcttacctacagctctggtgcccttagatgcaggatcggtatgcggtgt
tag
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