KEGG   Arabidopsis lyrata (lyrate rockcress): 9319699
Entry
9319699           CDS       T01578                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
  KO
K16285  RING/U-box domain-containing protein [EC:2.3.2.27]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9319699
Enzymes [BR:aly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     9319699
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    9319699
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-ANAPC11 zf-RING_Vps41 zf_RING_Vps8 zf-RING_16 U-box_ZFPL1 zf_RING_Vps8_fungal FANCL_C DUF3446 RNF220 zf-Nse Trm112p zf-RING_4 Prok-RING_4
Other DBs
NCBI-GeneID: 9319699
NCBI-ProteinID: XP_020888784
LinkDB
Position
Unknown
AA seq 161 aa
MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSVLGIVGISLSPSSSSPSSVTASSENP
TSEPFDFRVCQPESFLEEFRNRTPTLRFESLCRCKKQEDNECSVCLSKFEGDSEINKLKC
GHLFHKTCLEKWIDYWNITCPLCRTPLVVVAEDHQLSSNVW
NT seq 486 nt   +upstreamnt  +downstreamnt
atgggtttatcaagtcttcctggtccatcagaaggaatgttatgtgtgatattagttaac
acagcattatcgatctccattgttaaaggcattgtccgatcagtccttggcatagtagga
atcagtctctcgccttcttcatcctcgccttcctcagtgacggcatcttcagagaatcca
acttcagagccttttgatttccgggtttgccaaccagagagtttccttgaggagttcagg
aaccggactccgacactgaggtttgagagcttgtgcaggtgcaagaaacaggaggacaat
gagtgttcggtgtgcctgtcgaaattcgaaggggattcagagatcaacaagctaaagtgt
ggccatttgtttcacaaaacatgcttggagaaatggatagactattggaacatcacttgc
ccactgtgtaggactcctcttgttgttgtggcagaagaccatcagctttcttctaatgtt
tggtga

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