Arabidopsis lyrata (lyrate rockcress): 9319713
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Entry
9319713 CDS
T01578
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9319713
Enzymes [BR:
aly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
9319713
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
9319713
Prokaryotic type
9319713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
9319713
NCBI-ProteinID:
XP_002883646
UniProt:
D7L822
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MQLSSFPISPSKIFPFTKYHAPPVIIHQLAAQIQSHRSNFVSPVKVSGYFSSISRAIEEE
EEYRKARAAVNRKGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFI
THAHLDHIGGLPMYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPL
DVGETYELRNDIVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEIT
DTILSPEIAFTGDTTAEYMLDPRNADALRSKVLITEATFLDESFSTEHAQALGHTHISQI
IENAKWIRSKTVLLTHFSSRYHVEEIREAVLKLQSKVSAKVIPLTEGFRSRYS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcagctttcttcgtttccaatttcaccttccaaaatcttccctttcaccaagtaccat
gcccctccagtgattattcaccagctcgctgcacagatacagagccaccgtagcaatttc
gtgagtcctgtcaaagtctctggctatttctcatccattagccgagcaattgaggaagaa
gaagagtatcggaaagcacgcgccgccgttaaccgaaaaggcgtcgaattggagagttat
gcgattgaggggatttctgtaggtgggcatgagacttgtgttatcgtccctgagctcaaa
tgtgtctttgatattgggaggtgcccttctcgtgctattcagcagaagtttctttttatc
actcatgctcatcttgatcatattggagggctaccgatgtatgtagcgagccgtggttta
tacaatcttgagccaccgaaaatattcgtgccaccatctattaaagaagatgttgagaag
ctccttgagattcacaggactatgggtcaagtagagctgaatgtagaacttattccactc
gatgtaggtgaaacatatgagttgcggaatgacattgttgttagaccgtttgcaactcac
cacgttataccgagtcagggttatgtgatctactcggtgaggaagaagttgcagaagcaa
tatgctcaccttaaaggcaaacagatagaaaagattaaaaagtctggggtcgagattact
gacacgatattatcccctgagatagccttcactggagatacaactgcagagtatatgctt
gaccctcgtaacgctgatgcactgaggtcaaaagttcttataaccgaggcaactttcttg
gatgaaagttttagcactgagcatgcgcaggcactcggtcatactcatatatctcagatt
attgagaatgcaaagtggatccgaagcaaaactgtattattgacgcatttctcatcacgt
taccacgtagaggaaatccgcgaagctgtgcttaagttgcaatcaaaagtatccgcaaaa
gttattcctcttacagaaggtttcaggtcaagatattcttaa
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