Arabidopsis lyrata (lyrate rockcress): 9319802
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Entry
9319802 CDS
T01578
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9319802
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
9319802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_14
TPR_8
TPR_19
TPR_11
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_6
TPR_9
TPR_7
ANAPC3
TPR_10
ARM_TT21_C
ARM_TT21_5th
Fis1_TPR_C
NatA_aux_su
UBA_N4BP1
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
9319802
NCBI-ProteinID:
XP_020887231
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR
QILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKHREKEEQFILATRYYNKA
SRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSE
SLNLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIM
DLQANDSIGMRKGMDRMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVTTH
GPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETNNKPQEFVFPYFGLGQVQLKLGELK
GSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNDKALEYMRKATKLDPRDAQAFVGLGEL
LISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEFESALDNFKEALGDGI
WISFLDEKENLEQTGVSVLGYKDTGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQLHKT
EAATFLYQLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALSLLGE
LELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMRNEKRNPKLEATHLEKAK
ELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVNLA
HVYFAQGNFALAVKMYQNCLRKFFNNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLTP
SNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVHGFD
SKKIQTHVQYCSHLLEAAKVHREAAEREELQNRQRLEVARQAALAEEARRKAEEQRKYQL
EKRKQEEELRRLKQEEEKIQRIKEQWKSSTPGSHKRKDRVEDDDGEGKPSERRRKKGGKR
RKKDKSSRARHYEDDEEEAATMDDHNEVEDEDANTNYNREDEMTNQEAEEPVDDDAHDLL
AAAGLEDPDVYDDEVPASGVRRRRALSSSDEEGELMEESQPNQSPTREKEESNGEGEDAN
VEEED
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgtgtacataccggtacagaattcggaagaagaagttagggttgttcttgat
cagctccctcgtgacgcttctgatatccttgatatccttaaagccgaacaagctcctctc
gatctctggctcatcatcgcgagggaatacttcaagcaaggaaaaattgaacagtttcga
caaatattggaggaaggctcaagttctgacattgacgagtactatgctgatgttaagtac
gagagaatagcaatcttgaacgctctaggtgcgtattacagctacttgggtaaaactgag
acaaaacacagagaaaaagaggagcaattcatcttggcaacacgatattataacaaagcg
tcgagaatcgatatgcatgagccttccacttgggttgggaaaggtcagctcttactggct
aagggtgaaatagataatgcacttcaggcatttaagattgtgttagacactgcccctgat
aatgttcctgctcttctgggtcaggcttctgtagaatttaatcgtggacgtttttctgag
tcattaaacctatacaagagggccttgcaagtatttcctgggtgtcctgcagctgtgaga
ctgggaattggtctttgtcgttataagttggggcaactagataaagctcggcaagcgttt
gatcgtgttttgcagctagatcctgataatgttgaggctcttgtggcacttgggatcatg
gatttgcaagcaaatgattctataggaatgaggaaaggaatggacagaatgcagcaagca
tttgagatttatccatattgcgcatcagccctaaattatttggccaatcacttttttttc
actggccagcactttcttgttgagcagctgactgaaacggcattagccgtcacaactcat
gggccaacaaagtcacattctttttacaatttagcacggtcatatcatagcaagggggac
tatgaaaaggctgggatgtactatatggcagccatcaaagaaactaataataagccacaa
gaatttgtatttccttactttggtttgggtcaagtacaactaaagttgggggagctgaaa
ggatctgtatttaactttgagaaagtattagaagtctatcccgacaactgtgagactctg
aaggctctcgggcacttatacacccagcttggacaaaatgataaggcccttgagtacatg
cgaaaggccacaaaacttgatccacgtgatgcccaggcatttgttggccttggtgagctg
ctgatatcatctgacacaggggctgcacttgacgccttcaaaatggcacggacactcatg
aaaaagggagggcaagaggtgccgatagaagtcctgaatgacattggtgctttacatttt
gagagagaagaatttgagtctgcgcttgacaattttaaggaggctctgggtgatggaata
tggattagcttccttgatgaaaaagaaaatttggaacaaacaggtgtatctgttctaggg
tacaaggatacgggcattttccataggctgattgaaagtggtcactctgtcgatgtacct
tggaataaagtcacaactttgtttaacctggctagattacttgagcagttacacaaaaca
gaagcagcgacttttctgtatcaattgatacttttcaagtatcctggctacatagatgct
tatttgaggcttgctgcgagtgcaaaagctcagaacaatcttcctctggccattgaactg
gtgaatgaagctctgaaagtggacgataaaaatccaaatgcgttgtctctgcttggtgaa
ttggagcttaagaatgatgactgggttaaggcaaaggaaacctttcgagctgctaatgat
gcgactgatgggaaggactcatatgctattctctctctggggaactggaactatttcgcg
gcaatgcgcaatgagaaaagaaatccaaaattagaagctacacatctggagaaggccaag
gaactctatactaaagtcctgactcaacataattccaacatgtatgctgccaacggttct
ggcattgtattggcagagaaaggccaatttgatattgccaaagatgtttttactcaggtt
caagaagctgcaagtggaagtgtatttcttcagatgcctgatgtatgggtgaatctggct
catgtttactttgctcaagggaattttgccttagccgtgaaaatgtatcaaaactgcttg
cggaagttctttaacaacacagactctcaaattcttctttacttagcccgtacccattac
gaggctgagcagtggcaagagtgcaaaaagacactattaagggccattcacttgactcct
tcaaattacacattcagatttgatttgggtgctgtaatgcagaaatcatcgtcttccaca
ctgcaaaagaaaaaaagaacagctgatgaggtgcgctcaacagttgcagaagctgagaat
gctgttcgtgtattcactcaattgtctgctgcttcagacctccatgttcatgggtttgat
agcaagaagattcaaacccatgttcagtattgctcgcacttgctggaagcagcaaaagtt
caccgtgaagcagctgagcgtgaggagctgcagaaccgacagagattagaagttgctcgt
caggctgctttggcagaagaagcacgccgtaaagctgaagaacagaggaaatatcagttg
gagaaaagaaaacaggaggaagagctgagacgcctaaagcaagaagaagaaaaaattcaa
cgtataaaggaacaatggaagagctccacacctggatctcataagcggaaagatagagtg
gaagatgatgacggggaaggtaagcccagtgagcggagaagaaagaaaggcggaaagaga
agaaagaaggacaaaagctcaagggctcgacactacgaggacgatgaagaagaagctgcc
actatggatgatcataatgaagtggaagatgaagacgccaacactaattataacagggaa
gatgagatgacaaatcaagaagctgaggaacctgtggatgatgatgctcatgatcttctt
gctgctgctgggctcgaagatcctgatgtttatgatgatgaggtacctgcttcgggggta
agacgaagaagggcgctatcatcatcagatgaagaaggtgaattgatggaggagagtcag
ccaaatcaaagccccaccagagagaaagaagagagcaatggggaaggagaagatgctaac
gtggaggaagaagactag
DBGET
integrated database retrieval system
