KEGG   Arabidopsis lyrata (lyrate rockcress): 9319831
Entry
9319831           CDS       T01578                                 
Name
(RefSeq) ABC transporter C family member 13 isoform X1
  KO
K05674  ATP-binding cassette, subfamily C (CFTR/MRP), member 10
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:aly00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    9319831
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:aly02000]
    9319831
Transporters [BR:aly02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    9319831
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N MMR_HSR1 Dynamin_N RsgA_GTPase AAA_29 AAA_22 AAA_16 AAA_23 FtsK_SpoIIIE nSTAND1 DUF87 IIGP cobW DLIC
Other DBs
NCBI-GeneID: 9319831
NCBI-ProteinID: XP_020887118
LinkDB
Position
Unknown
AA seq 1440 aa
MAITLANSTLLYMDANLERLGDLYPSSASWVYRNLFLGFGANVVTLLLILILTIMRRNDR
CNRRKSYIEKCVLYVISALGACLSCVDLVLFVRTNRRREVMFLPLSRFAMWISIMLSSKF
ACACCVFASRILCFWWIFRFLTDALHLNMIFTLQSLECVKEICLIMLDIAFAISINVLRI
KQTPLKISSLEDPLIEEGDDQRRIEKTGSWWDLFTFGYIGSIMKHGSVKQLEFENLLPLP
PDMDPFTCCENLLRCWQLQECNNYSTPSLIWSISGVYGWPYFRLGLLKVFNDCIGFAGPL
FLNRLIKYLEKGSGSSVGYTLAISLGLISIFKSFLDTQYTFRLSKFKLKLRSSIMSVIYR
KCLWVNTANRSGFSEGEIQTFMSVDADRIVNLCNSLHDMWSLPLQIGIALYLLYTQVKFA
FLSGLAITILLIPVNKWISVLIASATEKMMKLKDERIRKTGELLTNIRTLKMYGWDNWFA
DWLKETRATEVTHLATRKYLDAWCVFFWATTPTLFSLCTFGLFALMGHQLDAATVFTCLA
LFNSLISPLNSFPWVINGLIDAFISTRRVSKFLCCLEHSRDFSIDSGLTSEDLAVFVEDA
SSTWSSNLEEDYNLTIKHVSLRVPKGSFVAVIGEVGSGKTSLLNSLLGEMRCVHGSILLN
GSVAYVPQVPWILSGTIRENILFGKPFDSKSYFETLSACALDVDISLMAGGDMACIGDKG
VNLSGGQRARLALARAVYHGSDMYLLDDVLSAVDSQVGCWILQRALLGPLLNKKTRVMCT
HNIQAISCADMIVVMDKGKVKWSGTVTDMPKSISPTFSLSNDFDMPSPNHLTKRKEPLSI
KKDDLDEISEAADIVKLEERKEGRVEVTVYRNYAAFSGWFIAIVILVSAVLMQASRNGND
LWLSYWVDKTGRGVSHYSTSFYLMVLCIFCIINSILTLVRAFSFAFGGLKAAVHVHSALI
SKLINAPTQFFDQTPSGRILNRFSSDLYTIDDSLPFILNILLANFVGLLGIIAVLSYVQV
LFLLLLLPFWYIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFKSEEH
FVARFIEHLTLYQRTSYSEIIASLWLSLRLQLLGAMIVLFVAVMAVLGSRGNFPISFGTP
GLVGLALSYAAPLVSLLGSFLTSFTETEKEMVSIERVLQYMDVPQEEVSGRQSLSGKWPV
QGLVEFHNVTMRYISTLPPALNHISFTIQGGMHVGVIGRTGAGKSSILNALFRLTPVCNG
EILVDGININHLPIRKLRSHLAVVPQSPFLFQGSLRDNLDPLGLSEDWRIWEILEKCKVK
AEVESAGGLDSNVKESGCSYSVGQRQLLCLARALLKSSKILCLDECTANIDVHTASLLHN
TISTECKGVTVITIAHRISTVLDLDSILILDRGILVEQGKPQHLLQDDSSTFSSFVRASK
NT seq 4323 nt   +upstreamnt  +downstreamnt
atggctattactcttgctaattccactcttctctatatggacgcaaacctggaacgtctg
ggcgacttatatccttcttcagcttcttgggtttataggaatttgtttttagggtttgga
gcaaatgtagttactcttcttctgattctgattctcacaataatgagaagaaatgatagg
tgtaacagacggaaaagctacattgagaagtgtgtgttgtatgtaatatctgcacttgga
gcatgtttgtcatgtgtggacttggtgttgtttgtgagaacaaaccgtaggagagaagtc
atgtttcttccgttgtctcgtttcgcaatgtggatttccatcatgctctcatcgaagttt
gcttgtgcgtgctgcgttttcgctagccggattttatgtttctggtggatctttagattc
ctaacagacgcccttcatcttaacatgattttcactttacagagtttggagtgtgtaaaa
gagatttgcctcatcatgttggacattgcttttgctatatctattaatgtccttaggata
aagcagacacctctcaaaatcagttctttggaagatccacttattgaggaaggtgatgat
caaaggcgcattgagaaaactggaagctggtgggatttgttcacttttggatacatcggt
tcaataatgaaacatggctcagtgaagcagctagaatttgaaaatctacttccactacca
cctgatatggatccttttacatgttgtgagaatttactgagatgctggcaacttcaagag
tgcaataattactcaactccatcactaatttggtcaatatctggtgtatatggatggcca
tattttcgtcttggactgttaaaggtgttcaatgattgcattggctttgcaggcccctta
tttctcaacagacttatcaagtatcttgaaaaaggttcaggaagttctgttggctatacc
cttgctatctccttgggcctcatttctatatttaagtcttttcttgatacacaatacacg
tttcgtctgtcaaagtttaaattaaagctccgatctagtataatgagtgtcatctacagg
aagtgtttgtgggtgaacacagcaaaccggtcaggattttctgagggcgagattcaaaca
tttatgtcggtagatgctgaccgcattgttaacttgtgcaacagtttgcatgacatgtgg
agcctgcctttgcaaattgggatagctttgtatcttttgtatactcaagtcaagtttgct
tttctgtctggacttgcaatcaccatcttgctgataccagtcaataaatggatatctgtg
cttattgcatctgcaacagagaaaatgatgaaactaaaagatgagaggattagaaaaaca
ggagaacttttaacaaacatacgcacactcaaaatgtatgggtgggacaactggtttgct
gattggttgaaggaaacaagggccaccgaagtgactcacttagcgactcggaagtattta
gatgcttggtgtgttttcttttgggcaacaacaccaactcttttttctctttgcactttt
ggtctctttgctctgatgggtcatcaacttgatgcagcaacggtgtttacttgtcttgct
ttatttaatagcttaatctctccattaaactcgtttccatgggtcatcaatggtctcatt
gatgcctttatatccaccaggcgtgtgagcaagttcttgtgttgtttggagcatagtaga
gatttttctatagattctggtttaacctctgaagacttagctgtgtttgtggaagatgca
tcttctacttggtcaagtaacctagaagaggattataacttgacaataaaacatgtaagc
ctaagagtgccaaagggatcctttgttgcagttatcggtgaggttggttcaggtaaaaca
tctttgttgaattcactattaggcgaaatgcggtgtgttcatggatcaatactattaaat
gggtctgtggcatatgtaccacaggtcccgtggattttatctggaactatacgcgaaaat
atcttattcgggaagccttttgactccaaaagctatttcgagacattgagtgcttgtgca
ctagatgtggatatttcacttatggccggaggagacatggcgtgtataggcgataaagga
gtaaacttatccggaggacaaagagctcggcttgctttggccagggctgtttatcatggt
tcagacatgtaccttcttgatgatgtactgagtgcagtggattcacaagtaggctgttgg
atattgcaaagagcacttctgggtcctctgttgaacaaaaagactcgcgttatgtgcact
cacaacattcaggcgatatcttgtgcagatatgattgttgtgatggacaaaggaaaagtg
aaatggtcaggaactgttactgatatgcctaaatccatttccccaacattttctttatcc
aatgactttgatatgccatcaccaaatcacttgaccaaaagaaaagaacctctatctatc
aagaaagacgatttagatgaaattagtgaagctgcggatatcgtcaaattggaggaacga
aaagagggccgagttgaagtaacggtttataggaactatgctgcattttctggttggttc
attgctattgtaatattggtttcagcggttttaatgcaagcttcccgtaatggaaatgat
ttgtggctatcatattgggttgacaagacaggaagaggagtatcacattactcaacctcg
ttttatttgatggttctgtgtatcttttgcatcattaactcaattctaaccttggtgagg
gcattctcgtttgcatttggaggattaaaagcagcagtgcatgttcatagtgcattgatc
agtaagcttataaatgcacctacacagttctttgatcagacaccaagtggaagaatactt
aacaggttttcctctgatctatataccatcgatgactctctcccgtttattctcaacatt
cttctagcaaattttgttggcttgttagggattattgcagtattgtcttatgttcaggtt
ctattcctgcttctgcttctgccattttggtacatatacagcaagcttcagttcttctac
aggtcaacgtcaagggaactacgaaggttggacagtgtttcaagatcaccgatctatgca
tcgttcacggagacacttgatgggtcatcaactatcagggcttttaagtctgaggagcat
ttcgtagctaggtttattgagcatttgacgttataccagcggacttcttactcagagata
attgcaagcttgtggctctccttgcgtcttcagttgttaggagcaatgattgtcttattt
gtcgcggtaatggctgttctcggctcccgggggaactttccaatcagttttggtacgcct
ggactggtgggattagctctctcatatgcagctccactggtttctctgttaggaagcttc
ttaacaagttttacggaaacagaaaaggaaatggtttctattgaaagggttctccagtac
atggatgtgcctcaagaagaagtttctggtcgtcaatctctcagcggtaagtggccggtt
caaggattagttgagtttcacaatgtgacaatgagatacatctcaactctgcctccggcg
ctcaaccacatttcttttacaatccaaggaggaatgcatgtaggagtaattggaagaact
ggtgccgggaaatcttcgatattgaatgcccttttccggcttactcctgtttgtaatgga
gagatattggtggatggaattaacataaaccatcttccaattagaaagcttcgttctcac
ctcgctgttgttcctcagagcccttttctgtttcaaggatcattgagggataaccttgat
cctcttgggttaagtgaggattggagaatctgggagatcctagagaaatgtaaagttaag
gcagaggtagaaagtgcaggagggttagattcaaatgtaaaggaatctggatgttcctat
tctgttgggcagagacagcttctgtgccttgcccgtgctttgctcaagtcatctaaaatc
ctatgccttgatgaatgcaccgccaacatcgatgttcacacagcttcactactgcacaac
acaatatcgacggaatgcaaaggcgtaacagtcattaccattgctcaccgcatttcaacg
gttcttgatttggacagcatccttattcttgatcgcggaattcttgttgaacaaggaaaa
ccacaacatcttttgcaagatgactcctcaactttctcaagctttgtcagagcttcaaaa
tga

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