Arabidopsis lyrata (lyrate rockcress): 9320054
Help
Entry
9320054 CDS
T01578
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9320054
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
9320054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
WD40_Prp19
WDR55
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
PALB2_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_RFWD3
RXT2_N
Motif
Other DBs
NCBI-GeneID:
9320054
NCBI-ProteinID:
XP_020886453
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MGRTVKTKAKRKNKKKAEASSSEIPSIPTRVWQPGVDTLEDGEELQCDPSAYNSLHGFHV
GWPCLSFDILGDKLGLNRTEFPHTLYMVAGTQAEKAAHNSIGLFKITNVSGKRRDVVPKT
LANGDDMEDEDDDDDSDSDDDDGDEASKTPNIQVRRVAHHGCVNRIRAMPQNSHICVSWA
DSGHVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRL
LSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI
RLGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYH
KHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFKAQTKELVNTPQDLPPQ
LLFVHQGQKDLKELHWHNQIPGMIISTAADGFNILMPYNIQNTLPSELPA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcaccgtgaaaaccaaggcaaagaggaagaacaagaagaaggcagaggcgtct
tcttcggagataccttcgataccaactagggtttggcaaccaggtgttgatacccttgaa
gatggagaagaacttcagtgtgacccttctgcttataattctctccatggctttcatgtt
ggttggccttgtttgagttttgacattttaggtgataagttgggtttgaaccgaactgag
tttcctcacacactttatatggtggctgggactcaggctgagaaagcagctcataactcc
atagggttatttaaaatcaccaatgtatctggtaagagacgtgatgttgtgcctaagaca
ttagcgaatggtgatgatatggaggatgaggatgatgatgacgacagtgacagtgatgac
gatgatggagatgaagcttccaaaactccaaatattcaggttcgaagggttgctcaccat
ggatgtgttaaccgtatacgtgcaatgccacaaaattctcacatctgtgtctcttgggca
gattctggtcatgtacaggtctgggacatgagctctcatcttaatgctttagccgaatca
gaaacagaaggtaaagatggaacttcaccggttcttaaccaagcacccttagtaaacttt
tctggccacaaagatgaaggctatgctatagattggagtcctgcaaccgctggaagactt
ctttccggggactgcaagagtatgattcacttgtgggagccagcttctggttcatgggct
gttgatcctattccgttcgctggacacactgcaagtgttgaagatttacaatggagtcca
gccgaagaaaacgtgtttgcttcatgttctgtggatgggagtgttgcagtatgggatatc
cgtcttgggaagtcgcctgcactatctttcaaggcacataacgcagatgtgaatgtcatc
tcatggaacaggctggctagttgcatgttggcctcaggaagtgatgacgggacattctcc
atccgtgatcttagactgatcaaaggtggagatgcagtggtagcacattttgagtaccat
aagcaccctatcacttcaattgaatggagcgctcatgaagcttcgacacttgcagtcact
tccggtgataaccagctcacgatatgggatctatccttagagaaggatgaagaagaagag
gcagagttcaaggcacagaccaaggagctagtcaacacacctcaagacttgcctcctcag
cttctcttcgttcaccaaggacaaaaggatctgaaggaacttcactggcacaaccagatt
ccggggatgatcatctcaactgctgctgatggtttcaacattttaatgccttacaacatt
cagaacacgcttccgtctgagctaccagcctga
DBGET
integrated database retrieval system
