Arabidopsis lyrata (lyrate rockcress): 9320253
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Entry
9320253 CDS
T01578
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9320253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9320253
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
9320253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
9320253
NCBI-ProteinID:
XP_002884187
UniProt:
D7L2T0
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MIRGGRSYVTSPPSFSNDAKKLLVCTGNTVSVFSAATGLQITSLEGHTALVTTLIVVPAS
TPAQKILCYCWTASLDGTIRHWDFSGPELLKTIDAQLPIYSMVIPSLLSEPQQIDKRREL
SGKLVAFVSVEDISVVNEGSKELRGHIRRFNLAKPRVPRGDTLKETAEPESIVISPSGEF
FGIRHKCKIHIWDIPSGGSRHAVSRKMTLHHTKVINAFAFHPTERVIAAGDVTGRVLIWR
GFGNRKLALGNQKKKVRATVDLDNAGVRGEDDTESCTTWHWHSAEVNVLNFSSDGAYLYS
GGREGVLVVWQLDTGKKKFLPRIGSPLLYFMWSPDPTLSSVVCADNQIHLLKMPSMEILR
TISGIKAPPSLPRMYEGLASTVAFDRSSGIAALCTENYCVQLYNLLNDRGISEIQVCERN
HQPGDEITVVVTAVALSLDGSVMSTTEVKLPEDGIGGLVSLKFWVSEPDSKTFTLSTIVY
EPHRDAGVSAIAFHPTRSMAVSTSFGGDFKIWVCNSDKNQTDKDSSWICHAVGSYKKKPM
TAAAFSGDGTVLAVAAENVITLWNPDKNILLSVLGATLTPITKLCFAGKSEFLVAASHFP
RPELSVWNTSKLSISWSYGLRVEAVTSAVDSSAFAVLAVIPKSFKTDKSKENIFRGRDGA
ILLFNGSDPKPVSIWTVIKAKGGSISFLGDKSQLRLAYVNGSREYVVFDPNSDESHERSA
VDYDGLAGLEETGDAGYTSLYGQLPDYDKKRMEDVDSLATPFISSERPWETIFSGSTLNF
PPLQKLCAEFFESLMEKRTAVVE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcggcgggagaagctacgtaacttcacctccatcattctccaacgacgctaaa
aagctcctcgtctgcacaggaaacactgtctctgttttcagcgccgccactggcttacag
attacttcgcttgaaggtcatacagctctagtaacaactctaattgttgttcctgcatcg
acccctgctcaaaaaatcctttgttattgttggactgcgtctcttgatggtacaattcgt
cattgggatttctctggacctgagcttttgaaaaccattgatgctcagctgccgatttac
tctatggttataccatctcttttgagtgaacctcaacaaattgataaacgtcgtgaatta
tctggtaagctggttgcttttgtttcggttgaggatataagtgtggttaacgaagggtct
aaagagttgcgtggacatatccggagatttaaccttgctaaaccgcgtgttcctcgtgga
gacactttgaaagagacggcagaaccagaatctattgttatcagtccctcgggagagttt
ttcggaatccgtcacaagtgtaaaattcatatatgggatattccttctggaggatcaagg
catgctgtttcaaggaagatgacactacatcacacaaaggttatcaatgcttttgctttt
catcccacggagagagttatagctgctggagatgtaacgggaagagtattgatttggaga
ggattcggtaatagaaaacttgccttgggtaatcaaaagaaaaaagtgagagcaacggtt
gatttggacaacgctggagtgagaggtgaagatgatactgaatcttgcactacatggcac
tggcactctgctgaagtaaacgtccttaatttctcttccgatggagcatatttgtattca
gggggaagggaaggggtacttgtcgtttggcagctagacacagggaagaagaaattttta
ccaagaataggatctcccttgctgtatttcatgtggtctccagatccaactctttcttct
gtggtttgtgcagataatcagatccatttgcttaaaatgccttccatggagatcttaagg
accatttctggaatcaaggctcccccatcattgcctaggatgtatgaaggcctggctagt
actgttgcctttgatcgatcttctggcatagctgctttgtgcacagagaattattgtgta
cagctatacaatcttcttaatgaccggggaatttcagagattcaagtttgtgagagaaac
catcaaccaggcgatgaaatcacagttgtggtgacagcggttgctctctccctggatggc
tcagtgatgagtacaaccgaggtgaaacttccggaagatggcataggaggcttagtgtcc
ctcaagttttgggtgtctgaaccagacagcaaaactttcaccttatccacaatcgtatat
gaacctcacagggatgccggtgtgtcagccattgcgttccaccctacccgctccatggca
gttagtacatcattcggtggggacttcaagatttgggtttgcaacagtgacaaaaaccag
acggataaggactctagctggatatgtcacgctgttggctcttataagaagaagccaatg
actgctgctgctttctctggggatggcactgttctggctgttgcagctgagaatgttatt
acgctttggaatccagacaagaacattctcttgtctgttctaggagcgacactcacgcct
atcacgaagctctgtttcgcgggaaagtctgagttccttgttgctgcatcccattttcca
agacctgaactatctgtttggaatacatcaaagttatctatatcttggtcatatggatta
cgcgtagaagctgtcacctctgcagtggattcatcagcatttgcagtcttggctgtgatc
ccaaaaagttttaaaacagataaatctaaggagaacatcttccgtggtagagatggtgcc
attcttttgtttaacggatcagatcctaagccagtatctatatggactgtgattaaggct
aagggaggatcaatctcatttttaggagacaagtctcagcttcgcctagcgtatgtaaat
ggaagccgtgagtatgttgtttttgatcccaatagcgatgagtcgcacgagcgtagcgct
gttgactacgacggtcttgctggtctggaagagacaggagacgccgggtacacatccttg
tatgggcagttacctgattatgacaagaagagaatggaggatgttgactcgttagcaaca
ccatttatatcatcagagaggccatgggaaacgatattcagcggctctacactaaatttc
ccgccacttcagaaattatgtgctgagttctttgagtccctaatggagaaaagaacggcc
gttgtggaatga
DBGET
integrated database retrieval system