Arabidopsis lyrata (lyrate rockcress): 9320312
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Entry
9320312 CDS
T01578
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
TRCF
T1R_D3-like
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
9320312
NCBI-ProteinID:
XP_020886378
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MTSLLPNPDPITIPLVFKLCSFPPPRRLFSLRLRRFTRKSSSILPFVAVSSLSATAAKPT
RWREKPELAESDSISLLNERIRRDIGKRETARPAMDSEETEKYIQMVKEQQERGLQKLKG
IRQGTEAAGTGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEY
ADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLME
LYLHRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRLICGDV
GFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHYDVISERFSLYPQIKVGLLSRFQTK
AEKEEYLEMIKDGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSV
DVLTLSATPIPRTLYLALTGFRDASLISTPPPERIPIKTHLSSFRKEKVIEAIKNELDRG
GQVFYVLPRIKGLEEVMDFLEEAFPDIDIAMAHGKQYSKQLEETMERFAQGKIKILICTN
IVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALER
LSALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEL
RIFSVPYDLVKIDININPRLPSEYVNYLENPMEIINEAEKAAEKDMWSLMQFTENLRRQY
GKEPYSMEIILKKLYVRRMAADLGVNRIYASGKMVVMKTNMSKKVFKLITDSMTCDVYRS
SLIYEGDQIMAELLLELPREQLLNWMFQCLSELHASLPALIKY
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgacatctttgctcccaaatcccgacccgattactatacccctcgtcttcaagctttgc
tcctttcctccgccacggaggctcttctctcttaggctcaggcgcttcacccgaaagtca
tcatctattcttccgtttgtcgctgtttcctctctctccgctactgccgcaaaacctacc
agatggagagagaagccggaattagcggaaagcgactcaatttccctcctcaacgagagg
attcggcgtgacatcggcaagagagagactgctcggccggccatggactctgaggagacc
gagaagtacattcagatggtcaaggaacaacaagagaggggtctgcagaagctcaaagga
atcaggcaaggtacagaggctgctggtaccggtggttttagctacaaggttgacccttac
agtctcctttccggtgattatgtggtgcacaagaaagtaggcattgggcgttttgttggg
ataaagtttgatgtccccaaggattcttcagagcccctcgaatatgtctttatagagtat
gctgatggcatggccaagcttcccctcaaacaggcctcgcgtttgctctaccgatacaat
cttccaaatgagaccaaacggcctcggactttgagtcggctgagtgacactagtgtgtgg
gaaagaagaaagaccaaaggaaaagtagcaattcagaaaatggtcgttgacttgatggag
ctgtatcttcataggcttagacagaagagatatccctatccaaaaaatcccatcatggct
gattttgcggctcaatttccttataacgctacacctgaccagaagcaggctttcctggat
gttgagaaggatttgacagagagagaaactcctatggaccgattgatctgtggagatgtt
gggtttggtaaaacagaggttgctttacgagccatcttttgtgtagtctcagctggaaaa
caagctatggttttagcaccgacaattgtattggcgaagcaacattacgatgttatctca
gagcggttttccttgtatccacaaattaaagtgggccttttaagtcggtttcagaccaaa
gcagaaaaggaggagtatttggaaatgataaaagatggacatctcaatatcattgtgggt
actcactcacttctcgggagccgtgttgtgtacagtaatttaggcctccttgtggttgat
gaggaacagagatttggggtcaagcagaaagaaaagattgcatctttcaaaacatcggtg
gatgtgcttacattatccgcaacacccataccaaggacactgtacttagctttgactgga
ttccgggatgccagtttaatctccacaccgcctccggagaggattccaataaaaacccat
ctttcgtcattccgtaaggaaaaggtgatagaagcaataaaaaatgagctggatcgtggt
ggccaagttttctatgtcttgcctcggattaaaggactagaagaagtgatggattttcta
gaggaagcatttccggatattgacatcgctatggcacatggaaagcaatactcgaaacaa
ctagaggaaaccatggagagatttgcgcaaggaaagatcaaaatcctcatatgcactaat
attgttgaaagcggacttgatattcaaaatgcaaataccataatcattcaggatgttcaa
caatttgggctcgctcagttgtaccagttgcgtggaagggttggtcgggcagataaagaa
gctcatgcctacctattttatcccgataaatcgctgctctctgatcaagcactggaaagg
cttagcgctcttgaagagtgccgtgaacttggacaaggtttccaacttgcagagagggat
atgggtataagaggttttgggacaatctttggagaacaacagacgggggatgttggaaat
gtcggtatcgatctcttctttgaaatgctttttgagagtctgtccaaggtggaggaactc
cgtattttttcggttccatatgacctagtgaagattgacataaatataaatccgcggcta
ccctcggagtatgtaaattacctggaaaatccgatggagatcattaatgaagctgaaaaa
gcagcggagaaagatatgtggagtctaatgcaattcacagagaacctgcgtcgccaatat
gggaaagagccttactccatggagatcattttaaagaagctgtatgtgagacgcatggcg
gctgatcttggagtaaacagaatttatgcatcaggcaagatggttgtcatgaaaacaaat
atgagtaagaaggtgttcaagctgatcacagattccatgacttgtgatgtttaccgaagc
tccttgatatacgaaggcgatcaaataatggcggaacttctgttggagctaccaagagaa
cagttactgaactggatgttccagtgcttgtcagaacttcatgcatcacttcctgccctt
atcaaatattag
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