Arabidopsis lyrata (lyrate rockcress): 9320335
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Entry
9320335 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RGLG1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9320335
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9320335
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9320335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
9320335
NCBI-ProteinID:
XP_002884269
UniProt:
D7L9M6
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MGGGNSKEESSSPSSSSWASHQSYPQYGPDSYNYPPPPTYTPPPAPVPAPAPSPSSSYGH
PYQMPHSQEGYASQPNYPPPPSQSHDADRKKFDRRYSKISDNYSSLLQVSEALGRAGLES
SNLIVGIDFTKSNEWTGAKSFNRKSLHHLSNTPNPYEQAITIIGRTLAAFDEDNLIPCYG
FGDATTHDQDVFSFYPEGRFCNGFEEVLARYREIVPHLKLAGPTSFAPIIEMAMTVVEQS
SGQYHVLVIIADGQVTRSVDTEHGRLSPQEQKTVDAIVKASTLPLSIVLVGVGDGPWDMM
QEFDDNIPARAFDNFQFVNFTEIMSKNKDQSRKETEFALSALMEIPPQYKATIELNLLGG
RNGSIPERIPLPPPVQSGSSFSSSRIPSFEPSVPTYPFESKHMSSGSDDNQLCPICLSNP
KNMAFGCGHQTCCECGPDLKVCPICRAPIQTRIKLY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagggaattccaaagaagagtcgtcatctccatcttcatcatcatgggcttct
catcaaagttatcctcaatatggacctgatagctacaactatcctcctccacccacttat
actcctcctcctgctccggtgcctgctcctgctccatctccgtcttccagttatggccat
ccttatcagatgccgcatagtcaagagggctatgcatcacagcctaattatcctccaccg
ccttcacagagtcatgatgctgaccggaagaaatttgatcggaggtattcgaaaatatcg
gataactactcttctttactgcaggtgtcggaggctctaggtcgtgcaggtcttgaatct
tcaaatctaatcgttggtattgatttcaccaagagcaatgaatggacaggggccaagtcc
ttcaataggaaaagcttgcatcacttaagcaataccccgaatccatacgaacaggcaata
actatcataggaagaaccttagccgcctttgacgaggataacttaattccttgttatggt
tttggagacgcaacaactcatgatcaagatgtgtttagtttctatccagagggtagattc
tgtaatggatttgaggaagtattggctcgttatagagaaattgtacctcaccttaagctc
gcaggaccaacatcttttgccccgatcattgaaatggcaatgacagtggttgagcagagt
agtggccaatatcatgtgttagtgattatagctgatggccaggtcacaagaagtgtcgat
accgaacatgggcggctaagtccgcaagaacagaagacggtcgatgcaattgtgaaagca
agtacccttcctttgtcaatagtcttagtcggggtcggggatggaccatgggacatgatg
caggaatttgatgataacatacctgcccgagctttcgataacttccaatttgtgaacttc
acagagatcatgtcaaagaacaaagaccagtctcggaaggagacagaattcgcactctct
gctctcatggagattcctccacagtacaaagcaacgatagagcttaaccttttaggggga
agaaatgggagtatcccagagagaatcccacttccgccaccggtgcagagcggatcatca
ttctctagttccagaataccgagttttgaaccgagtgtacctacttatccatttgagagc
aagcatatgagcagtggttcagacgataaccagctatgtccgatatgtctgagcaacccg
aaaaacatggcgtttggttgtggccatcagacttgttgtgaatgcggaccagatcttaaa
gtgtgtccgatttgtcgtgccccgatccagaccagaatcaagctctactaa
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