KEGG   Arabidopsis lyrata (lyrate rockcress): 9320392
Entry
9320392           CDS       T01578                                 
Name
(RefSeq) ubiquitin receptor RAD23c
  KO
K10839  UV excision repair protein RAD23
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03420  Nucleotide excision repair
aly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    9320392
  09124 Replication and repair
   03420 Nucleotide excision repair
    9320392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:aly03051]
    9320392
   03400 DNA repair and recombination proteins [BR:aly03400]
    9320392
Proteasome [BR:aly03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    9320392
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      9320392
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD CUE UBA_3 Dsc3_N Rad60-SLD_2
Other DBs
NCBI-GeneID: 9320392
NCBI-ProteinID: XP_020887332
LinkDB
Position
Unknown
AA seq 417 aa
MKIFVKTLKGTHFEIEVKLEDSVADVKKNIETVQGADVYPAAKQMLIHQGKVLKDETTIE
ENKVAENSFIVVMLNKSKPASTGASSASAGTSQAKSTPPSTSQPSISPQTPASVAAPVAP
APTRAPPPAPTPAPVAATETVTTPIPEPVPATIPSSTPAPDSAPAGSQGDVYGQAASNLA
AGSNLESTIQQILDMGGGTWDRETVVRALRAAFNNPERAVEYLYTGIPEQAEVPPVARAP
ASFGQPANPSAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGTLDFLRNSQQFQAL
RAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAG
MPQPQAIQVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgaagatatttgtgaaaactctcaaggggactcactttgagatcgaagtaaaactagag
gattcggttgctgatgtgaagaagaacatagagactgtgcagggcgcagatgtatatcct
gctgcaaaacagatgcttattcaccaaggtaaagtgcttaaagatgagactactattgag
gaaaacaaagttgctgagaacagttttattgtcgtaatgctgaacaagagtaaacctgct
tctactggagcatctagtgcatctgctggcacttcgcaggccaagtcgacacctccctca
acatcacaaccttcaatttcccctcagactccagcttctgtagcagcaccagtggcacct
gcaccgacacgtgcgccaccacctgccccgacacctgcacctgtagctgcaactgaaact
gtgactacacctatacctgaacctgtacctgctactataccatcaagcactcctgcacca
gactcagctcctgcgggaagtcaaggtgatgtttacggacaagcagcatcaaatctagcc
gctggaagtaatttagagagtaccattcagcagattcttgacatgggtggaggaacctgg
gatcgtgagactgttgtccgtgcacttcgtgctgcatttaacaaccccgaaagagctgtg
gaatatctttatactgggatccctgagcaagctgaagttccaccagttgcccgtgctcca
gctagttttggacagcctgcaaatccttcagcacagactcaacaacctgcagcagcacct
gcaagtggtcctaatgcaaatccgttagatctcttcccgcagggcttgccaaatgttgga
ggaaatcctggtgctggaacacttgacttcttgcgcaacagccaacagttccaagctctg
cgagcaatggtgcaagcaaaccctcaagttctgcagcccatgcttcaggaactgggaaag
cagaacccaaacttgatgcggttgattcaagaccaccaagctgacttcttacgcttaatc
aatgaacccgttgaaggagggggagaaagtggcaacctccttggccaaatggcagcggga
atgccacagccacaggcgattcaagtcacacctgaggaacgcgaagcaattgaacggctt
gaagcgatgggatttgacagagcattggtgttggaagtgttctttgcgtgcaacaagaat
gaagagttggctgcaaactatcttctagatcacatgcatgagttcgaggaataa

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