Arabidopsis lyrata (lyrate rockcress): 9320392
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Entry
9320392 CDS
T01578
Name
(RefSeq) ubiquitin receptor RAD23c
KO
K10839
UV excision repair protein RAD23
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03420
Nucleotide excision repair
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9320392
09124 Replication and repair
03420 Nucleotide excision repair
9320392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aly03051
]
9320392
03400 DNA repair and recombination proteins [BR:
aly03400
]
9320392
Proteasome [BR:
aly03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
9320392
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
9320392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
UBA_RAD5A
UBA_3
Dsc3_N
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
9320392
NCBI-ProteinID:
XP_020887332
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKLEDSVADVKKNIETVQGADVYPAAKQMLIHQGKVLKDETTIE
ENKVAENSFIVVMLNKSKPASTGASSASAGTSQAKSTPPSTSQPSISPQTPASVAAPVAP
APTRAPPPAPTPAPVAATETVTTPIPEPVPATIPSSTPAPDSAPAGSQGDVYGQAASNLA
AGSNLESTIQQILDMGGGTWDRETVVRALRAAFNNPERAVEYLYTGIPEQAEVPPVARAP
ASFGQPANPSAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGTLDFLRNSQQFQAL
RAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAG
MPQPQAIQVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatttgtgaaaactctcaaggggactcactttgagatcgaagtaaaactagag
gattcggttgctgatgtgaagaagaacatagagactgtgcagggcgcagatgtatatcct
gctgcaaaacagatgcttattcaccaaggtaaagtgcttaaagatgagactactattgag
gaaaacaaagttgctgagaacagttttattgtcgtaatgctgaacaagagtaaacctgct
tctactggagcatctagtgcatctgctggcacttcgcaggccaagtcgacacctccctca
acatcacaaccttcaatttcccctcagactccagcttctgtagcagcaccagtggcacct
gcaccgacacgtgcgccaccacctgccccgacacctgcacctgtagctgcaactgaaact
gtgactacacctatacctgaacctgtacctgctactataccatcaagcactcctgcacca
gactcagctcctgcgggaagtcaaggtgatgtttacggacaagcagcatcaaatctagcc
gctggaagtaatttagagagtaccattcagcagattcttgacatgggtggaggaacctgg
gatcgtgagactgttgtccgtgcacttcgtgctgcatttaacaaccccgaaagagctgtg
gaatatctttatactgggatccctgagcaagctgaagttccaccagttgcccgtgctcca
gctagttttggacagcctgcaaatccttcagcacagactcaacaacctgcagcagcacct
gcaagtggtcctaatgcaaatccgttagatctcttcccgcagggcttgccaaatgttgga
ggaaatcctggtgctggaacacttgacttcttgcgcaacagccaacagttccaagctctg
cgagcaatggtgcaagcaaaccctcaagttctgcagcccatgcttcaggaactgggaaag
cagaacccaaacttgatgcggttgattcaagaccaccaagctgacttcttacgcttaatc
aatgaacccgttgaaggagggggagaaagtggcaacctccttggccaaatggcagcggga
atgccacagccacaggcgattcaagtcacacctgaggaacgcgaagcaattgaacggctt
gaagcgatgggatttgacagagcattggtgttggaagtgttctttgcgtgcaacaagaat
gaagagttggctgcaaactatcttctagatcacatgcatgagttcgaggaataa
DBGET
integrated database retrieval system