Arabidopsis lyrata (lyrate rockcress): 9320417
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Entry
9320417 CDS
T01578
Name
(RefSeq) heat stress transcription factor A-1e
KO
K09419
heat shock transcription factor, other eukaryote
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9320417
Transcription factors [BR:
aly03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
9320417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
AFAP_C
Plectin_PPL
DUF7801
ZapG-like
Laa1_Sip1_HTR5
Transketolase_C_1
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
9320417
NCBI-ProteinID:
XP_020889453
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MGESVATAVMSSIPPFLSKTYDMVDDPLTDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFK
HNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQILKSIVRRKPSQVQPPQQPQVQH
SSVGACVEVGKFGLEEEVERLQRDKNVLMQELVRLRQQQQVTEHHLQNVGQKVHVMEQRQ
QQMMSFLAKAVQSPGFLNQFSQQSNDANQHISESNKKRRLPVEDQMNSGSHGVSGLSRQI
VRYQSSMNDATNTMLQQIQQMSNSPSHESLSSNHGSFLLGDVPNSNLSDNGSSSNGSSGV
TLADVSSIPAGLYPAMKYHDPCETNQVLETNLPFSQGDLLPPTQGVAASGSSSSDLVGCE
TDNGECLDPIMAVLDGAIELEADALNELLPEVQDCFWEQFIGESPVIGETDELISGSVEN
ELLMEQLELQSGLGSVWSKNQQMNYLTEQMGLLTSDTLRK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaatctgtagcgacggcggtgatgagctctatcccgccttttctgagcaaaacc
tacgatatggttgacgatccattgacggacgacgtggtgtcttggagcagcggcaacaac
agcttcgtggtttggaacgtgcctgagttcgcgaaacagtttctaccaaagtatttcaag
cacaacaatttctccagtttcgtcagacagctcaatacttatggtttcagaaaagttgat
ccagaccgctgggagtttgcaaatgagggctttttaagaggccaaaaacaaatactaaag
agtattgtccggcgaaaaccttcgcaagtgcagcctccacaacaacctcaagttcagcac
tcatctgtgggtgcgtgcgttgaagtgggcaaatttggactcgaagaagaggtggaaaga
cttcagagggataagaacgtccttatgcaggaacttgtaaggttaaggcagcaacaacaa
gttaccgaacatcatctgcaaaatgtgggacagaaagttcatgtgatggagcagaggcag
caacaaatgatgtcctttctagcaaaggctgttcaaagtccaggtttcttaaaccaattt
tcccagcagagtaatgacgcaaaccaacacatttctgaaagcaacaaaaagaggaggcta
cctgttgaggaccagatgaattctggcagtcatggggtcagcggtcttagccgccagatt
gtgagatatcagtcatcgatgaacgatgcaacaaacactatgctccaacagatacaacag
atgagtaattcacctagccatgaatctctctcaagcaatcatggcagctttcttttgggc
gatgttccaaattccaacctttcagacaatgggagctcctcaaatggatcatctggagtt
acattggcagatgtttcatccattcctgcaggcttatatcctgcaatgaagtatcacgac
ccttgtgaaacaaatcaagtcctggagaccaatttacctttttctcaaggtgatctctta
cctccaacgcaaggagtagcagcttctgggagctcgagttcggatcttgttggatgcgag
acagataatggagaatgtttggatccaataatggctgttttggatggtgcaatcgaacta
gaagctgatgccttaaatgagttgcttcctgaagtccaagattgtttttgggaacagttc
attggtgagagtccagtgattggtgagacagatgagctaatctcaggatcagtggaaaat
gaactgttaatggagcagctagaattacaatcaggcctgggtagtgtgtggagcaagaac
caacaaatgaactatcttactgaacagatgggacttctcacatcagatactctcagaaaa
tga
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