Arabidopsis lyrata (lyrate rockcress): 9320614
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Entry
9320614 CDS
T01578
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00061
Fatty acid biosynthesis
aly00071
Fatty acid degradation
aly01100
Metabolic pathways
aly01212
Fatty acid metabolism
aly04146
Peroxisome
Module
aly_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
9320614
00071 Fatty acid degradation
9320614
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
9320614
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
aly01004
]
9320614
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9320614
Enzymes [BR:
aly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
9320614
Lipid biosynthesis proteins [BR:
aly01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
9320614
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of breast milk
9320614
Exosomal proteins of breast cancer cells
9320614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
9320614
NCBI-ProteinID:
XP_020887154
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MDSSSSSAAARRRINAIHSHLVTSSRSSPLLRSNPTAGEFCLDNGYSVVLPEKLNTGNWN
VYRSAKSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMTYG
EAGTARTALGSGLVHHGIPMGSSVGIYFINRPEWLIVDHACSSYSYVSVPLYDTLGPDAV
KFIVNHATVQAIFCVAETLNSLLSCLSEMPSVRLVVVVGGLNESLPSLPSSTGVKVVSYS
VLLNQGRSNPQRFFPPKPDDVATICYTSGTTGTPKGVVLTHANLIANVAGSSFSVKFFSS
DVYISYLPLAHIYERANQILTVYFGVAVGFYQGDNMKLLDDLAALRPTVFSSVPRLYNRI
YAGIINAVKTSGGLKERLFNAAYNAKKQALLNGKSASPIWDRLVFNKIKDRLGGRVRFMT
SGASPLSPEVMEFLKICFGGRVTEGYGMTETSCVISGMDEGDNLTGHVGSPNPACEVKLV
DVPEMNYTSVDQPHPRGEICVRGPIIFRGYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGR
LKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVGQCFIYGDSFNSSLVAVVSVDPDVLK
SWAASEGIKYGGDLRELCNNPRVKAAVLSDMDTVGREAQLRGFEFAKAVTLVLEPFTLEN
GLLTPTFKIKRPQAKEYFAEAITNMYKELGASDKGL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcttcttcctccgccgccgcacgccgccgcatcaacgctatccactctcat
ctcgtcacctcttctcgctcttcccctctcctccgctccaatcccaccgccggcgagttc
tgtcttgataatggctacagtgttgttctccccgagaaattgaatactggcaattggaac
gtctacagatctgcaaagtctccgttcaagctcgttagcagattcccagatcatcctgac
atcgctactctccatgacaattttgagcatgctgttcatgattttcgggattacaagtat
ttaggaactcgtgttcgtgtcgacggaactgttggagactacaaatggatgacatatgga
gaagctggtacagcaagaactgctttaggttcgggtttagttcatcacggaatccccatg
ggatcatctgttggaatttactttatcaaccgccccgagtggctcatcgttgatcatgct
tgttcttcttattcttatgtgtctgttcctttgtatgatactcttggtcctgatgctgtg
aagtttattgtcaatcatgcaactgtgcaagccatattttgtgtggcagagactttaaac
tctttacttagctgtttgtctgagatgccaagtgtacgcctggtggtggttgttggaggg
ttgaatgaatctttaccctctcttccctcatcaacaggagtgaaagttgtatcatattcg
gtgttactgaatcagggtcgtagtaaccctcagcggttttttccaccaaaacccgatgat
gttgcaaccatatgctatacaagcggaacaactgggacacccaagggagtcgtattaact
catgcaaacttgattgcgaatgttgctggctccagctttagtgtgaaatttttctcgtca
gatgtttacatttcgtatcttccactggcacacatttacgaacgagctaatcagatccta
acagtgtactttggagttgctgttggattctatcaaggggacaatatgaaactactggat
gatttggctgctctgagacctactgtgttcagcagtgtccctcgattatacaatagaata
tatgctggtatcattaacgcagtaaaaacctctggtgggctgaaagagagactcttcaat
gctgcctataatgcaaagaagcaggctctcttgaatggaaagagtgcttctcccatatgg
gacaggttggtatttaataagataaaggacagacttggagggcgggttcgttttatgacg
tctggtgcttcacctctgtctcctgaagtgatggaatttttgaaaatatgctttggagga
agggtaacagagggatatggaatgactgaaacatcttgtgttataagtggaatggacgag
ggtgataacctcactggacatgttggctctcctaatccagcttgtgaagtaaagcttgtg
gatgtcccggaaatgaactatacatcagtggatcagccccatccccgtggcgaaatatgt
gttaggggtcctataatttttagaggctattacaaagatgaagttcaaacgaaagaggtg
attgatgaagatggatggcttcacactggagatataggtctgtggctgccgggaggacgt
ctcaaaattattgacaggaagaagaacatcttcaaactggcgcagggcgagtatatagct
ccagagaaaattgaaaacgtttatgctaaatgcaaatttgtgggccagtgctttatatat
ggtgatagctttaattcatcattggtagctgttgtatcggttgatccagatgtgctgaaa
agctgggctgcttcagaaggcattaagtatggaggagatctgagagaattgtgcaataac
ccgagagtgaaagcagcagtactatctgacatggacactgttggaagagaagctcagttg
agaggctttgagtttgcaaaggctgtgacattggtgctggaaccatttactctggaaaat
ggcttgttgactccgacattcaagattaagagaccacaagcaaaggaatatttcgcagaa
gcaataacaaacatgtacaaggagcttggtgcttctgataaaggtttgtga
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