Arabidopsis lyrata (lyrate rockcress): 9320658
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Entry
9320658 CDS
T01578
Name
(RefSeq) nuclear poly(A) polymerase 3 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9320658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9320658
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
9320658
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
9320658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
MTPAP-like_central
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
9320658
NCBI-ProteinID:
XP_020887451
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MKKGGGRNKGFPPSMEDGSSISLRQLMVNEGLIPSLEDQEKRRVVINKLRKIVVRWVKNV
AWQHRLPQNQIDATNATILPYGSYGLGVYGSESDIDALCIGPFFASISEDFFISLRDMLK
SRREVSEVHCVKDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSW
KSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCG
YESNATLSSLLANFFYIFAHWQWPTPVVLLEDTYPATGAPPGLMPIQLPCGSHQYCNSNI
TRSTFYKIMAEFLRGHNLTKDYLKPNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSD
WVGWVKSRFRCLLSKIEEVYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVE
TEFLKNLNSGSFQGPVGRIQLSVVKESQLPKNGECASNNRSKKVTKTCWRIRENKQCNNV
PVYSHHLPGYVVGYQKMANREADGMAG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagggaggtgggagaaataaaggttttcctccttctatggaagatggaagctcg
atttcgcttcgtcagctgatggttaatgaaggactgattccatctcttgaagatcaggag
aaacgaagagttgtcatcaataagctacgaaagatagtggtgagatgggttaagaatgtt
gcctggcaacaccgtcttccacaaaatcagattgacgccaccaacgccaccattttacct
tatggttcttatggtcttggggtttatggttctgaatcagacatcgacgctctctgcatt
ggtcctttctttgcctctatttctgaggattttttcatctccttgcgtgatatgttgaaa
agcagacgagaagtttccgaggttcattgtgttaaagatgcaaaagttcctctcatccgc
tttaagtttgatgggatcttggttgatcttccatatgctcagcttagagtattatccatt
ccaaacaatgtagatgtgcttaatcctttctttctgagggatattgacgagacaagttgg
aaaagcttgtctggagttcgtgcaaataaatgcatacttcagttagtgccttccttagag
ctattccaatcattgctgcggtgtgtcaaattatgggcaaagaggcgaggtgtatacggt
aatttgaatggatttctaggaggagttcatatggctattcttgctgcatttgtttgtgga
tacgaatcgaatgcaacattgagttcccttctggcaaatttcttctacatatttgctcac
tggcaatggcctacaccggtggtgctgctagaggacacttatccagcgactggggctcct
ccaggcttaatgcccatccaattgccatgtggttcacatcaatactgcaactccaacata
acaagaagcactttttacaagataatggcagagtttctacgagggcataatttgacaaag
gattacttgaagcccaacttcagttggaagaatttgtttgagctctatccatacgaaaac
acatacacgtggttcaccaaaatacacctctcggctgctaaccaggaagatctcagtgat
tgggttggttgggttaagtcacgtttccgttgtcttctgagcaagatagaggaagtttat
ggcatttgcgatccaaacccaacagagtatgttgaaacctatacaaagcagccaaacatt
gtcttttactggggattacagctcagaaccataaatgtttcggacattgaatctgtggag
acagaatttctgaagaatctcaacagtggaagcttccagggaccagttggtagaatccag
ttatcggttgtaaaagagtctcaactgcctaagaatggtgagtgtgctagcaacaacaga
agcaagaaggtgacaaagacttgttggagaatccgggaaaataagcaatgcaataatgta
ccggtttactcacatcatttgcctggttatgtggttgggtatcagaagatggctaacaga
gaagctgatggtatggcgggttaa
DBGET
integrated database retrieval system
