Arabidopsis lyrata (lyrate rockcress): 9320736
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Entry
9320736 CDS
T01578
Name
(RefSeq) exopolygalacturonase clone GBGA483
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Module
aly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9320736
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
9320736
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
9320736
NCBI-ProteinID:
XP_002884670
UniProt:
D7L721
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MVGFRRASGVLLVLLVVMATTIANGTPVVDKAKNAAESVGDKVSEAATTVGDKAKDAAAS
VGAKVPGAKAGGASLDVKASGAKGDGKTDDSAAFMAAWKEACAAGSTITVPKGEYLVESL
EFKGPCKGPVTLELNGNLKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWK
ANDCAKTGKCNSLPINIRFTGLTNSKIKSITSTNSKLFHMNILNCKNITLEDIGIDAPPE
SLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYP
NEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSTPVLIDQEYCP
YGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGP
AVSACSNIKPILSGKLVPAACTEVAKPGP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttttcgaagagcaagcggagtgcttctagtgcttctagtggttatggccacc
acaatagcaaacgggacaccggttgtcgataaagcaaaaaatgcagctgaatcagttggt
gataaagtcagtgaagcagctacaacagttggcgataaagcaaaagatgcagctgcatca
gttggcgctaaagtaccaggagccaaagcaggcggtgcatcacttgatgttaaagcatca
ggagccaaaggagatggcaaaactgatgacagtgcggcatttatggctgcatggaaagaa
gcgtgtgcagcagggagcacgattacagtgcccaaaggtgagtatttggtagagagccta
gagtttaaaggtccatgcaaaggtccagtcactttggaattgaatggcaatctaaaggct
ccggctacggtcaagaccactaaacctcatgccggatggattgatttcgaaaatctcgct
gatttcactttgaatggaaacaaagctatatttgacggtcaagggtccctcgcttggaag
gccaatgattgtgccaaaactggcaaatgcaactctctccccatcaacatccgattcacg
ggtctaacaaactcgaaaattaagagtattacatcaacaaacagcaaacttttccacatg
aacatccttaactgcaaaaacataactcttgaggatattggtattgatgcacctccggag
agtctcaacaccgatggtatccacatcggaaggtccaatggcgtcaacttaataggggca
aagattaaaaccggagatgactgcgtttccattggagatggtaccgaaaatctcattgtt
gagaacgtagaatgtggaccaggacacggaatttccattggaagtcttggaagataccct
aacgagcaaccagtaaaaggagtcaccgtgaggaaatgcctcatcaagaacactgataat
ggtgttcgcatcaagacatggccaggatctccccccggtatcgcctccaacattcttttc
gaagatatcacaatggacaatgttagcacccccgttctcatcgaccaagagtactgtcct
tatggccactgcaaagctggggtaccatcgaaagtgaagttgtcggacgtgactatcaag
aacattaaggggacatcagcaacaaaggtggctgtgaagctaatgtgcagcaaaggagtg
ccttgcaccaatattgctctttctgacatcaacttggtccacaacggcaaagagggacca
gctgtctcggcatgttctaacatcaagcctattctctccggcaagttggttccagcagct
tgcactgaagtcgctaaaccgggtccttaa
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