Arabidopsis lyrata (lyrate rockcress): 9320853
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Entry
9320853 CDS
T01578
Name
(RefSeq) DNA gyrase subunit B, chloroplastic
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9320853
03400 DNA repair and recombination proteins [BR:
aly03400
]
9320853
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
9320853
DNA replication proteins [BR:
aly03032
]
Prokaryotic type
DNA Topoisomerases
9320853
DNA repair and recombination proteins [BR:
aly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
9320853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
9320853
NCBI-ProteinID:
XP_020886426
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSLTVTINSSMALVQRQHSYLHRYFRLMASRPRLFSHSSYPSLHRHSSSLTSSTPRIKFQ
LANVFSQRLVQRNAVSPKSFMSSTMESLQESSTSKDYSSEHIQVLEGLDPVRKRPGMYIG
STGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTDLHPATGKS
ALETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSR
GKPVTTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKVTI
SLKKEDDDPERDLYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCS
DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLSGEHVREGL
TCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAY
KAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRR
FQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDA
DVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASF
PANASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVEDAAETNMVFSSLMGARVDVR
KELIKSAATRMNLENLDI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgactgtgaccatcaactcttccatggctctagttcagagacaacactcttat
cttcaccgttattttcgtctcatggcttctcgtcctcgtctcttctctcactcttcgtat
ccttcacttcaccgtcactcctcatctctcacctcttcaacacccaggataaagtttcag
ttagccaatgtttttagtcaaagacttgtacaaagaaatgcggtctcacctaaaagtttt
atgtcatcgaccatggagtctctccaagagagctctacctctaaggattatagttccgag
cacatccaagtgttggaagggttagacccagtcaggaaaagacctggaatgtatattggt
agcaccggatctcgtggtttgcaccatctggtttatgagatccttgacaacgcaattgac
gaggcccaagctggttttgcttcaaagatcgacgttgttttacattcagatgattcagtc
agcatttcagacaatggacgtgggatacccacagatttgcatcctgcaacgggaaaatcg
gctttggaaactgtccttacggtcttacatgcagggggtaagtttggtggcaagagtagt
gggtacagcgtgtctggtggattgcatggcgtaggtttatcagttgtgaatgcattgtca
gaggcattggaggttattgttcgcagagatgggatggagtttcagcagaagtattctcgt
ggaaagcccgtaacaacacttacatgtcatgtcctcccaccagagtcaagggggactcaa
gggacatgcatccggttttggcctgacaaagaagtattcacaactgcaattcaattcgac
cataacactattgctggacgaattagggagcttgcttttctaaatccaaaggttacaatc
tctctaaaaaaggaggatgatgatccagaaagggacttgtatagtgaatatttttatgct
ggagggttaactgaatatgttagctggctaaatactgataagaaacctcttcatgatgtg
ctcggtttcagaaaagagataaatggctccaccgttgatgtttcacttcagtggtgctca
gatgcctattcagacacgatgctgggatacgcgaatagtattcggaccattgatggtggg
acacatatagaaggtgtgaaggcttcattaacaagaactctaaattcccttgcgaaaaag
ttaaaggttatcaaggaaaaggatattagcttaagtggggaacatgttagggagggattg
acctgcattgtctctgtcaaggttcctaaccctgagtttgaaggtcaaacaaagacaaga
ctaggaaatccagaggtgagaaaaattgttgatcaatcagtccaggaatacctcacggag
tacttggaattgcatccggatgtacttgaaagcattatttcaaaatccttgaatgcgtac
aaggctgctctggctgccaagagggctagggagttggtgagatcaaaaagcgttttgaag
tcatcctcacttcctgggaaacttgcagattgctcatctacagatcctgcagaatctgag
atattcattgtcgaaggagattctgctggtggcagcgcgaaacagggtcgtgacaggcgt
ttccaggcgattcttcctttgagaggtaaaattttgaatattgagagaaaggatgaagca
gccatgtataagaacgaagaaattcaaaatctaattcttggccttggtcttggagttaag
ggagaagattttaacaaggagaatctgcgttaccataaaattatcatcttaacagatgca
gatgttgatggtgcacatatccggacacttctgttaacctttttcttcagatatcagaga
gccttgtttgacgctggttgtatatatgttggtgttccacctcttttcaaggttgagagg
gggaaacaggcacactattgctacgatgatgcagctcttaaaaaaattaccgcttcgttc
cctgcaaacgcatcttacaacattcagaggttcaaaggtttgggtgagatgatgcctgcg
cagctatgggaaacaacaatgaacccagatacaaggatattgaagcaactagttgttgag
gacgcagcagaaacgaatatggtcttctcatctctgatgggtgctcgggtggatgtcagg
aaggaactcatcaaaagcgctgcgactaggatgaatctggagaatctcgacatataa
DBGET
integrated database retrieval system
