Arabidopsis lyrata (lyrate rockcress): 9320877
Help
Entry
9320877 CDS
T01578
Name
(RefSeq) alpha-L-arabinofuranosidase 1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00520
Amino sugar and nucleotide sugar metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
9320877
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
9320877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-L-AF_C
CBM_4_9
GFP
zf-CHCC
Motif
Other DBs
NCBI-GeneID:
9320877
NCBI-ProteinID:
XP_020886842
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MDMESWKLLRSVCLLSFLLGSCFVYQSLRVVDAQEDPKPAVTLQVDASNGAGRPIPDTLF
GIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSIVGDHSSIYVATDRSSCFER
NKIALRMDVLCDSKDCPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDVSVSLTSS
NGSLTLASEKIIASASDVSKWIKKEVLLEAKSTDPSARLQLTTTKKGSIWIDQVSAMPVD
TYKGHGFRNDLFQMMVDIKPRFIRFPGGCFVEGEWLSNAFRWKETVGPWEERPGHFGDVW
KYWTDDGLGHFEFFQMAEDIGAAPIWVFNNGISHNDEVETASIMPFVQEALDGIEFARGD
ANSTWGSVRAKMGRQEPFELKYVAIGNEDCGKTYYRGNYIVFYNAIKKAYPDIKIISNCD
GSSHPLDHPADYYDYHIYTSASNLFSMYHQFDRTSRSGPKAFVSEYAVTGKDAGTGSLLA
SLAEAAFLIGLEKNSDIVEMASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFFA
ESSGATLLTSTLKGNSTSLVASAISWENNGKDYIRIKAVNFGANSVNMKVLVTGLDPNVM
RVTGSKKTVLTSTNVMDENSFSQPEKVVPHESLLEMAEEDMTVVLPPHSFSSFDLLKESA
KIKMPISDSSSHQKTTTV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggatatggagtcttggaagttgctcagaagtgtttgcctactttcttttctccttggc
tcttgttttgtgtatcaaagccttcgtgttgttgatgctcaagaagatccaaaaccagcc
gtgactttgcaagtagatgcttctaatggagctggacgacccattcctgatacgctattt
gggatattcttcgaggagatcaaccatgctggtgccggtggattatgggccgaacttgta
agcaacagagggtttgaagctggtgggcaaaacacgccctctaatatttggccatggtcc
attgttggtgatcattcatccatatatgtagctacagaccgttcatcatgctttgaacgc
aataaaatcgcattgagaatggatgtactttgtgatagcaaagattgtccatcgggaggt
gtcggagtttataaccctggttactggggcatgaatattgaagaaggaaagaagtacaag
gtggctctttatgtgcgttcaactggcgatatcgatgtgtctgtgtcgttgacgagctcg
aatggatcactgactcttgcttctgaaaagatcatagcttcggcttctgatgtttcgaaa
tggattaaaaaagaggttcttttggaggcaaaaagtacagatcctagtgcaagactccag
ttaacaacaaccaagaaagggtcaatatggattgaccaagtctccgccatgccagtggat
acttacaagggacatggttttagaaacgatcttttccaaatgatggttgatattaaaccc
cgtttcatccggttcccaggtggttgttttgtcgagggtgaatggttaagtaatgccttc
cgatggaaagaaactgtaggaccttgggaagagagaccgggccattttggtgatgtttgg
aagtattggaccgatgatggccttggccactttgagttctttcaaatggcagaagacatt
ggtgcagccccgatatgggtgtttaacaacgggataagtcacaatgatgaagttgaaact
gccagtatcatgccctttgttcaagaagcacttgacggtatcgagtttgcccggggagat
gctaattctacatggggatcagttagagctaaaatgggacgccaagaaccttttgaactg
aaatacgttgctattgggaatgaagattgtggaaaaacttactatagaggaaactatatt
gtgttctataatgctatcaaaaaagcctatccagatatcaaaatcatctccaactgcgat
ggatcatctcatccgcttgaccacccagctgattactatgactatcacatttacacttct
gctagcaatttgttttctatgtatcatcaatttgaccgcacttcacgcagtggtccaaag
gcttttgtcagtgaatatgctgtgactggaaaagatgctggtacgggaagccttctcgcc
tctcttgcagaagctgcgtttctcattggtcttgaaaagaatagtgacattgtggaaatg
gcaagttatgcaccactctttgtgaacacaaatgatagacggtggaaccctgatgcaata
gtcttcaattcctctcatctatatggaactccaagctattgggtgcaacggttcttcgca
gagtcaagcggagcaactcttctcacttcaacactcaagggaaactcaacttctcttgtc
gcatctgcaatctcttgggaaaacaatggcaaagattacatacgcatcaaggctgtaaac
ttcggagctaactcagtaaatatgaaagtgttggtaactggattagacccgaacgtgatg
agagttacaggatcaaagaagacagtacttacatctaccaatgtgatggatgaaaattcc
ttctcacagccagagaaggttgtgccacatgaaagcttgctagagatggcagaggaggat
atgaccgttgttctcccgccacattccttttcttcattcgatttgctgaaggaatctgca
aagattaaaatgccaatttctgattcttcttcccatcagaaaactaccactgtgtga
DBGET
integrated database retrieval system