Arabidopsis lyrata (lyrate rockcress): 9321108
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Entry
9321108 CDS
T01578
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00300
Lysine biosynthesis
aly00470
D-Amino acid metabolism
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01230
Biosynthesis of amino acids
Module
aly_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
9321108
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
9321108
Enzymes [BR:
aly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
9321108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
9321108
NCBI-ProteinID:
XP_020886082
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MAAATQCLSQPSSSLNPYQLKNQTSQLSRIIPIFSLKSTLKPLKRLSVKATAVSQNSTKT
LTKFDHCFKKSSDGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEALEGVTSV
IGYAIKANNNLKILEHLRSLSCGAVLVSGNELRLALLAGFDPTKCIFNGNGKLLEDLVLA
AQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRN
EKLQWFLDQVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYL
NIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGV
KTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPPPPEAEVTKFDVVGPVCESADFLGK
DRELPTPPQGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSISKIRHAETFDDHLR
FFEGL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctactcaatgtctctcccaaccttcatcatctctaaatccataccaactg
aagaaccaaacctcacaactctccagaatcatccctatcttttctcttaaatccacattg
aagccacttaaacgcctctccgtgaaagccaccgccgtttcccaaaactccaccaaaacc
ctcacgaagttcgaccactgtttcaagaaatcatcagatgggtttctctattgcgaagga
actaaagttgaggatatcatggagtcagtcgagagaagacctttttacttatatagtaaa
cctcagatcacgaggaacctcgaggcttataaagaagcattggaaggtgtgacatctgtc
attggttacgctatcaaagctaataacaatctcaagattttggagcatttgaggtcttta
agctgtggtgctgtgctcgtcagtggaaatgagctcagacttgctcttcttgctggtttc
gatcccacaaagtgcattttcaatggaaatggcaagttgttggaagatttagttctagct
gctcaggaaggtgttttcgttaatgtcgatagtgagtttgacttgaataacattgtggaa
gcttcaagaatttctggtaagcaggtcaatgtactgctgcgtatcaatcctgatgtcgat
cctcaggtgcatccatatgtagctactgggaacaagaactcaaagtttggtatccggaac
gagaagcttcaatggtttctggatcaggtcaaggcacatcccaaagagctgaagcttgtt
ggagctcattgccatctaggttctaccattactaaggtggatatattcagagatgctgca
gttctcatgatagaatacattgatgagatccggcgtcaaggttttgaagttagttacttg
aacattggtggtggtttagggatagattattatcatgccggcgctgtccttcccacaccc
atggatctcatcaacacggtaagagagcttgttctttcacgagacctgaatctaataatc
gagccagggagatctctgattgcaaacacttgctgtttcgtcaatcatgtaactggtgtg
aagacgaatggaactaaaaacttcatagtgattgatggaagtatggctgagcttatccgt
cccagtctttatgatgcttatcagcacattgagttggtctctcctccaccgcctgaagca
gaggttaccaaattcgacgtagtgggtcctgtctgtgaatctgctgatttcttgggcaaa
gacagagagcttcccactcctccacagggagccggtctggtggttcatgacgctggtgca
tactgtatgagcatggcttccacttacaatctcaagatgcgccctccggagtactgggtt
gaagaagatgggtcgatcagtaagataaggcatgctgagacattcgatgatcatttgcgt
ttctttgaaggtctatga
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