KEGG   Arabidopsis lyrata (lyrate rockcress): 9321139
Entry
9321139           CDS       T01578                                 
Name
(RefSeq) E3 SUMO-protein ligase MMS21
  KO
K22756  E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9321139
   03400 DNA repair and recombination proteins [BR:aly03400]
    9321139
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   9321139
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     9321139
SSDB
Motif
Pfam: zf-Nse zf-MIZ U-box RSB_motif zf-C3HC4_2 DUF2119 SctB-like zf-RING_2
Other DBs
NCBI-GeneID: 9321139
NCBI-ProteinID: XP_002885073
UniProt: D7L3Z5
LinkDB
Position
Unknown
AA seq 248 aa
MASASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLEN
SVAELLDLYSDCNHRSSAIQSVANGYQPGEQLTDFKKLLDDEFTKLKATPSVPQNEHLMR
QFREAVWNVHHAGEPMPGDDEEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHV
YEKAVILHYIVNNPNGNCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIED
FTEDLDED
NT seq 747 nt   +upstreamnt  +downstreamnt
atggcgtcggcgtcctcgtctgacggagttgccggaaggattcagaacgcttcgttggtt
cttgtgtccgataacagttccacgcttgctgatatccgaaaagctgtggcaatgatgaag
aacattgctgttcaattggagaaagaaaatcaaactgacaaggttaaggatcttgaaaat
tctgtggctgagctattggatttgtatagtgattgtaatcaccgttcgtcagcaattcaa
tccgtggcaaatgggtaccaacccggggaacagttaacggactttaaaaagttgcttgat
gatgaattcacaaaactcaaggctacaccttctgtgccgcaaaatgagcatttgatgcgc
cagttcagggaagcagtttggaacgttcatcatgcaggtgaaccaatgcctggtgacgat
gaagaggacattgtcatgaccagtactcagtgccctctactaaacatgacgtgtcccttg
agcgggaagcctgtcactgaactagcagatccagttcgcagtatggattgcaggcacgtc
tatgaaaaagctgtaatcctgcattacatagtcaacaatccaaatgggaattgtcctgta
gcaggatgccgaggtaaactgcagaacagcaaagtgatttgtgatgcaatgttgaagttt
gaaatcgaggagatgcgctcgttgaacaaacaatctaatagggctgaagtgattgaagac
ttcacagaagatctcgacgaagattag

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