Arabidopsis lyrata (lyrate rockcress): 9321139
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Entry
9321139 CDS
T01578
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9321139
03400 DNA repair and recombination proteins [BR:
aly03400
]
9321139
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
9321139
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
9321139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Nse
zf-MIZ
U-box
RSB_motif
zf-C3HC4_2
DUF2119
SctB-like
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
9321139
NCBI-ProteinID:
XP_002885073
UniProt:
D7L3Z5
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MASASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLEN
SVAELLDLYSDCNHRSSAIQSVANGYQPGEQLTDFKKLLDDEFTKLKATPSVPQNEHLMR
QFREAVWNVHHAGEPMPGDDEEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHV
YEKAVILHYIVNNPNGNCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIED
FTEDLDED
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgtcctcgtctgacggagttgccggaaggattcagaacgcttcgttggtt
cttgtgtccgataacagttccacgcttgctgatatccgaaaagctgtggcaatgatgaag
aacattgctgttcaattggagaaagaaaatcaaactgacaaggttaaggatcttgaaaat
tctgtggctgagctattggatttgtatagtgattgtaatcaccgttcgtcagcaattcaa
tccgtggcaaatgggtaccaacccggggaacagttaacggactttaaaaagttgcttgat
gatgaattcacaaaactcaaggctacaccttctgtgccgcaaaatgagcatttgatgcgc
cagttcagggaagcagtttggaacgttcatcatgcaggtgaaccaatgcctggtgacgat
gaagaggacattgtcatgaccagtactcagtgccctctactaaacatgacgtgtcccttg
agcgggaagcctgtcactgaactagcagatccagttcgcagtatggattgcaggcacgtc
tatgaaaaagctgtaatcctgcattacatagtcaacaatccaaatgggaattgtcctgta
gcaggatgccgaggtaaactgcagaacagcaaagtgatttgtgatgcaatgttgaagttt
gaaatcgaggagatgcgctcgttgaacaaacaatctaatagggctgaagtgattgaagac
ttcacagaagatctcgacgaagattag
DBGET
integrated database retrieval system