Arabidopsis lyrata (lyrate rockcress): 9321140
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Entry
9321140 CDS
T01578
Name
(RefSeq) AP-5 complex subunit zeta-1
KO
K19025
AP-5 complex subunit zeta-1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
9321140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9321140
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
9321140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
9321140
NCBI-ProteinID:
XP_002882915
UniProt:
D7L3Z6
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MSDQEGDWNFYLRILSNSARDSTDPASDPSILQSVKKLHGFCKLEKSDDLVARIYPQINK
VFHRSVASLSQSESGTSKGLLLLAILQFFLDFGDMVLHDADPSLRTFFRSCLSREFSDSA
VAEATCEFLVANQRKLLASFPNLLPQFFPLLLKLIAWNWEKLEKSFLKIFPGLISPGSFL
PLFPSIVDLPMLVVALEKVERSSGSGSRVGGSIASIQKSAAPEMLLALMDEAYTGSTIGD
GGDDSESEDNNTIDVADPLFLELLKDENDGLAERHRASPTLNAALQAAARGPQSERMKQT
LKIAPRLLDVYFSVTLRDANDSLICALIPLLMTRNSTMFPDKNFSHEIRKRLLEFVLAAF
QRSPNFIALLKKPIIDRLGEAYDDVAKRELALQLCWAIGEYGGGGESHKEAARELFESLE
LLLYENLSSSRLGLRQESGNGSRRTTQSRLLCFVVTAIAKLATYHRELLPRARVALGKVV
RSWISDARVWRRAHDYLGLMNEPGICWSVLGPSRVSEKKFPGTVNWSEGGQKMVAHIPFH
ILSEQGGPPFHDFAFSDIIPKN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaagaaggagactggaatttctatctcagaatcctaagcaatagcgcgcgg
gattccacggatcctgcttctgatccatctatactacaatcagtgaagaagctacatggg
ttctgtaaattggagaaatcagatgatcttgtggctagaatttatccacaaatcaataag
gtcttccatcgttcggttgcttcactgtctcagtctgagtcagggacgtccaaaggcctt
ctcttgctagccattctacagttttttcttgattttggggatatggttctgcacgatgct
gacccaagtttgaggacattcttccgctcatgtcttagccgtgagttctcagattctgct
gttgcagaggcaacttgtgaattccttgttgcgaaccagagaaagctcttagcatctttc
ccaaacttactccctcagtttttcccgttgttgcttaagctcattgcctggaattgggag
aagttggagaagtcatttctgaagatatttccaggactgatatctcctgggtcatttctt
cctctgtttccatccattgtagatttgccaatgttggttgtggcattagaaaaggtggaa
aggagctcggggtctgggtcaagggttggaggtagcattgcttcaattcagaagagtgca
gctccggagatgcttcttgcccttatggatgaagcatatactggttcaaccatcggggat
ggaggggatgactctgaatctgaagataacaatacaatagatgtagctgatcctctgttt
ctggagcttctgaaggacgaaaatgatggtctagctgaaagacaccgcgcttctcctaca
ttgaatgcagcgctacaggctgctgcacgtggtcctcagtctgagaggatgaagcagact
cttaagattgctcctcgacttcttgatgtctactttagtgttacattgcgagatgcaaat
gactctctgatatgtgcattaatccctctactcatgacaagaaactctacaatgtttccg
gataagaatttttctcatgagatccgtaagaggctactagaattcgtactagctgcattt
cagaggtccccaaatttcattgccctgctgaaaaagcctataattgaccggcttggcgaa
gcttacgatgatgttgcaaagagagagttagccttacagctatgttgggcaattggagag
tatggtggcgggggagaatcgcacaaagaagctgctcgcgagctttttgaaagtttagag
ttgcttctatatgagaatctctcatcaagccgcctaggtttgaggcaagagtctgggaat
ggttccagaagaacaacacagtcaagacttttgtgttttgtagtgacagctatcgcaaag
ctcgcaacatatcaccgggaattgttaccaagagcccgtgtcgccttgggaaaggtagta
cggtcttggatatctgatgcaagggtttggagacgagcacatgattacttaggactaatg
aacgaaccaggaatctgttggtctgtgttaggaccatcacgggtttcagaaaaaaagttt
ccaggcacagttaactggagcgagggcggacaaaaaatggttgcacacattccatttcac
atccttagtgaacaaggaggtcctccgttccatgactttgctttctccgatatcatcccc
aaaaactga
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