KEGG   Arabidopsis lyrata (lyrate rockcress): 9321140
Entry
9321140           CDS       T01578                                 
Name
(RefSeq) AP-5 complex subunit zeta-1
  KO
K19025  AP-5 complex subunit zeta-1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    9321140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    9321140
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AP-5 complex
     9321140
SSDB
Motif
Pfam: SPG48 TPR_AP5Z1_C Adaptin_N
Other DBs
NCBI-GeneID: 9321140
NCBI-ProteinID: XP_002882915
UniProt: D7L3Z6
LinkDB
Position
Unknown
AA seq 562 aa
MSDQEGDWNFYLRILSNSARDSTDPASDPSILQSVKKLHGFCKLEKSDDLVARIYPQINK
VFHRSVASLSQSESGTSKGLLLLAILQFFLDFGDMVLHDADPSLRTFFRSCLSREFSDSA
VAEATCEFLVANQRKLLASFPNLLPQFFPLLLKLIAWNWEKLEKSFLKIFPGLISPGSFL
PLFPSIVDLPMLVVALEKVERSSGSGSRVGGSIASIQKSAAPEMLLALMDEAYTGSTIGD
GGDDSESEDNNTIDVADPLFLELLKDENDGLAERHRASPTLNAALQAAARGPQSERMKQT
LKIAPRLLDVYFSVTLRDANDSLICALIPLLMTRNSTMFPDKNFSHEIRKRLLEFVLAAF
QRSPNFIALLKKPIIDRLGEAYDDVAKRELALQLCWAIGEYGGGGESHKEAARELFESLE
LLLYENLSSSRLGLRQESGNGSRRTTQSRLLCFVVTAIAKLATYHRELLPRARVALGKVV
RSWISDARVWRRAHDYLGLMNEPGICWSVLGPSRVSEKKFPGTVNWSEGGQKMVAHIPFH
ILSEQGGPPFHDFAFSDIIPKN
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgagtgatcaagaaggagactggaatttctatctcagaatcctaagcaatagcgcgcgg
gattccacggatcctgcttctgatccatctatactacaatcagtgaagaagctacatggg
ttctgtaaattggagaaatcagatgatcttgtggctagaatttatccacaaatcaataag
gtcttccatcgttcggttgcttcactgtctcagtctgagtcagggacgtccaaaggcctt
ctcttgctagccattctacagttttttcttgattttggggatatggttctgcacgatgct
gacccaagtttgaggacattcttccgctcatgtcttagccgtgagttctcagattctgct
gttgcagaggcaacttgtgaattccttgttgcgaaccagagaaagctcttagcatctttc
ccaaacttactccctcagtttttcccgttgttgcttaagctcattgcctggaattgggag
aagttggagaagtcatttctgaagatatttccaggactgatatctcctgggtcatttctt
cctctgtttccatccattgtagatttgccaatgttggttgtggcattagaaaaggtggaa
aggagctcggggtctgggtcaagggttggaggtagcattgcttcaattcagaagagtgca
gctccggagatgcttcttgcccttatggatgaagcatatactggttcaaccatcggggat
ggaggggatgactctgaatctgaagataacaatacaatagatgtagctgatcctctgttt
ctggagcttctgaaggacgaaaatgatggtctagctgaaagacaccgcgcttctcctaca
ttgaatgcagcgctacaggctgctgcacgtggtcctcagtctgagaggatgaagcagact
cttaagattgctcctcgacttcttgatgtctactttagtgttacattgcgagatgcaaat
gactctctgatatgtgcattaatccctctactcatgacaagaaactctacaatgtttccg
gataagaatttttctcatgagatccgtaagaggctactagaattcgtactagctgcattt
cagaggtccccaaatttcattgccctgctgaaaaagcctataattgaccggcttggcgaa
gcttacgatgatgttgcaaagagagagttagccttacagctatgttgggcaattggagag
tatggtggcgggggagaatcgcacaaagaagctgctcgcgagctttttgaaagtttagag
ttgcttctatatgagaatctctcatcaagccgcctaggtttgaggcaagagtctgggaat
ggttccagaagaacaacacagtcaagacttttgtgttttgtagtgacagctatcgcaaag
ctcgcaacatatcaccgggaattgttaccaagagcccgtgtcgccttgggaaaggtagta
cggtcttggatatctgatgcaagggtttggagacgagcacatgattacttaggactaatg
aacgaaccaggaatctgttggtctgtgttaggaccatcacgggtttcagaaaaaaagttt
ccaggcacagttaactggagcgagggcggacaaaaaatggttgcacacattccatttcac
atccttagtgaacaaggaggtcctccgttccatgactttgctttctccgatatcatcccc
aaaaactga

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