KEGG   Arabidopsis lyrata (lyrate rockcress): 9321187
Entry
9321187           CDS       T01578                                 
Name
(RefSeq) coatomer subunit beta'-3
  KO
K17302  coatomer subunit beta'
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9321187
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9321187
Membrane trafficking [BR:aly04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    9321187
Exosome [BR:aly04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   9321187
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N WD_LRWD1 TPR_CcmH_CycH TPR_GEMI5
Other DBs
NCBI-GeneID: 9321187
NCBI-ProteinID: XP_020886233
LinkDB
Position
Unknown
AA seq 915 aa
MPLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYAGTVCIWNYQTQTITKSFEVTDLPV
RSAKFIPRKQWVVAGADDMHIRVYNYNTMDKVRVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDSSGKIIWAKHNEIQTANIKSIGAGYEVTDGERLPLSVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFSKNFQ
ERKSIRPTFSAEKIFGGTLLAMCSNDFICFYDWAECRLIQQIDVTVKNLYWAESGDLVAI
ASDTSFYILKYNRDLVSSHFDSGRPTDEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS
SWKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDRANQILPTIPKEQHNNVAHFLESREMIEDALEIATDLDYKFDLAIQLGRLEIAKE
IAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLA
KEQGKNNVAFLCLFTLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWREDLSK
VNSKAAESLADPEEYPNLFEDWQVALSVEANTAETRGVYTAAENYPSHADKSSITLVEAF
RNLQVEAEESLENGVIDHEVVEENGHVENEGDDEEQQEEEVNEEEGVVDADSTDGAVLVN
GSEGEEEWVLTPHPS
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgcctctcagactcgatatcaagagaaaatttgctcaacgatcagagagagtcaaatct
gttgatctgcatcctactgaaccatggattctagcaagtttgtatgctggaaccgtgtgt
atttggaactaccagacacagacgattacaaaatccttcgaggtgaccgacttgccagtt
aggtcagccaagtttattccgcgcaagcaatgggttgttgctggagcggatgatatgcac
atccgtgtatacaattacaatacgatggacaaggtcagagtatttgaggctcattcggat
tacattaggtgtgtagctgtccatccgacccttccatatgtgctgtcatcttctgatgat
atgctcataaagctttgggactgggaaaacggttgggcttgtactcagatatttgaggga
cattcgcactatgtgatgcaagtggtatttaatccaaaagataccaacacttttgccagt
gcatcgcttgatcgtaccataaagatatggaatcttggttccccagacccaaattttaca
ctggatgctcatcagaaaggagtcaactgtgtagattatttcacagggggtgataaaccc
tatctaattactggctctgatgatcatactgctaaggtatgggactatcaaaccaaaagt
tgtgtccagacgctagatgggcacacacacaatgtttctgccgtatgtttccacccagaa
cttccaataataatcacaggttctgaggatggcactgttcgcatttggcacgccacgact
tacaggctagaaaacacattgaattatggtctcgagagagtttgggccattggttacatc
aaaagttcgcggcgggttgtgattggatatgatgaaggaaccatcatggttaagcttgga
cgagaaattcctgtcgctagcatggacagtagcggaaaaatcatatgggctaagcataat
gaaattcaaactgcaaacatcaaaagtattggtgcgggttacgaggttactgatggagaa
agacttcccttgtctgttaaagagttggggacctgtgatctttatccacaaagcttgaag
cacaaccctaatgggaggtttgtcgtagtctgtggtgatggagagtacataatctacaca
gctttggcttggagaaatagatcttttgggtctggcctggaatttgtttggtcatccgag
ggggaatgtgcggttagagaaagctcatcaaagataaagatattcagtaaaaatttccag
gaaaggaagagtatccggcctactttctcagctgagaagatttttggaggaaccttgtta
gcaatgtgttcaaatgatttcatctgcttctatgattgggctgaatgcaggctgattcaa
caaattgatgtcaccgtaaagaatctttattgggctgaaagtggtgatttagtagccatt
gctagtgatacgtcattctacatcttgaagtacaatcgcgacttggtttcctcgcatttt
gatagtggaagaccaactgatgaagagggtgttgaggatgcttttgaggttctccatgag
aatgatgaacgtgttaggacaggtatatgggttggggactgcttcatttacaacaactct
tcttggaagcttaactattgtgttggaggcgaggtaaccacaatgtatcatttggaccgc
ccaatgtatttgttaggctatattgccaaccaaagccgggtgtacttggtagacaaagaa
ttcaatgtcataggatataccctgctgcttagcctgattgaatacaagactcttgtgatg
cgaggcgatttggatagagctaatcaaattttacctacaattcctaaagagcagcataac
aatgttgctcatttcttggaatctcgggaaatgattgaagatgctttagaaattgcgaca
gatctagactacaaatttgatctggccatacaactgggtagacttgaaattgcaaaggaa
attgctgaagaagtacagagcgagtctaaatggaagcagttaggagagttagccatgtcc
tctgggaagctgcaattggcggaggattgcatgaagtacgctatggatttgagtggtttg
ttactactatattcttctttaggagatgctgaaggggtgtcaaaacttgcatgccttgct
aaggaacaggggaagaacaatgttgcctttctttgcttatttacgctgggtagattggaa
gattgtctgcagttattggtggagagtaaccggatacctgaagctgctctgatggcacgt
tcttatcttccgagcaaagtttcagagatagtagctctttggagggaagatctcagcaag
gttaattcaaaagcagcagaatctttagctgatcctgaagagtacccaaatctttttgag
gattggcaagttgctctttctgttgaagcgaacactgcagagacaaggggagtttatact
gctgcagaaaattatccatcccatgccgataaatcttccattaccctcgtggaagccttt
agaaacctgcaagttgaagcagaggaatcacttgaaaatggagtcattgatcacgaggta
gtagaagaaaacggtcatgtagagaatgaaggagatgatgaggaacaacaggaagaagaa
gtgaatgaagaagagggagttgtggatgcagactctacggacggtgctgtacttgttaat
ggaagtgagggtgaggaagagtgggtgcttacgccacatcctagctag

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