Arabidopsis lyrata (lyrate rockcress): 9321290
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Entry
9321290 CDS
T01578
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 19 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
9321290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9321290
Ion channels [BR:
aly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
9321290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
9321290
NCBI-ProteinID:
XP_002883079
UniProt:
D7L7B7
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MASSTENDEFPILPIPKATPRAHTRAFTSRNRSVSLSNPTFSFDGFDSSSVVLGYTGPLR
TQRIRPPLVQMSGPLHSTRRTEPLFSPSPQEPPDSSSSSTVNVPPEDDFVFQNANLLRSG
QLGMCNDPYCTTCPSYYNRQAAQFHTSRVSTSRFRTVLYDDARGWAKRFASSVRRCLPGI
MNPHSKFVQVWTRVLAFSSLVAIFIDPLFLFLLFIQQDNKCLAIDWRATKVLVSLRSITD
LVFYINILLQFRLAYVAPESRIVGAGQLVDHPRKIARHYFQGKFFLDLFIVLPIPQIMIL
WIIPAHLGTRREEYEKQIIRATVLFQYIPKLYRLLPLLAGQTPTGFIFESAWANFVINLL
TFMLAGHAVGSCWYLSGLQRVKKCMLNAWNISVDERRNLIDCSRGSYASESQRALWRDGA
SVNACFQESGFTYGIYLKAVNLTNQSSFFTRYSYSLFWGFQQISTLAGNLSPSYSVGEVF
FTMGIIGLGLLLFARLIGNMQNFLQSLDRRRMEMMLRRRDVEQWMSHRLLPEDIRKRVRE
AERYNWAATRGVNEEFLFENMPDDLQRDIRRHLFKFLKKVRIFSLMDESVLDSIRERLKQ
RTYIRSSTVLHRRGLVEKMVFIVRGEMESIGEDGSVLPLSEGDVCGEELLTWCLERSSIN
PDGTKIKMPTKGLVSNRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQGAIRYESP
YWRLQAAMQIQVAWRYRKRRLQRFYTAQSSSNN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcgaccgagaacgacgagtttcccattcttccaattccaaaagcaacacct
cgtgctcacactagggcttttacttccaggaaccgtagtgtttctctctcaaacccaact
ttctcctttgacggatttgacagctcgagtgtggttttaggttacacaggtcctcttcga
acccagcgaataagacctcctttagtgcaaatgagtggtcctcttcactctactcgcaga
acagaacctctcttctctccttctcctcaagaacctcctgattcctcctcctcctctacc
gttaatgttccacctgaagatgattttgtcttccaaaacgcaaatctcttgagatctgga
cagttagggatgtgcaatgatccttactgcactacttgcccttcttactacaaccgccaa
gctgctcaatttcacacttccagagtttctacctctaggtttcgcactgttctgtatgat
gatgctagaggttgggctaagcgatttgcctcctctgttcgtagatgcttacctggaata
atgaatcctcattccaaattcgttcaagtctggactagagtcttagccttttcaagctta
gtggccatttttatagatcctctcttcttgttcctcttatttatccaacaagacaacaaa
tgcttagcgattgattggcgtgcgactaaagtattggtgtctcttagaagtataacggat
cttgtattctacattaacattctacttcagtttaggttggcctatgtagcccctgaatct
agaatagttggtgccggccagttagttgatcatccaagaaaaattgctcgccattacttc
caaggaaagttttttcttgatctgttcatagtgttacccattccacagataatgatatta
tggataataccagcacacttgggcacacgcagggaagaatatgagaaacagattatacgc
gctacggttctttttcaatacattccaaagttatatagactcttacctcttcttgctgga
caaacaccgaccggcttcatatttgagtcagcctgggctaattttgttattaatcttctc
accttcatgcttgctggtcacgctgttggctcttgctggtatctttctggtctgcagaga
gttaagaaatgcatgctgaatgcttggaatatttctgtggatgaacgtagaaatcttatc
gattgttcgcgtggaagttatgcatcggagtcacaaagagctctctggagagatggtgct
agtgtcaatgcttgttttcaagagagtggttttacttatgggatctatctgaaggcagtg
aatcttaccaatcaatctagtttcttcacaagatacagttattctctgttttggggattc
caacaaataagcacacttgctggaaacttatccccaagttactcagtgggggaggttttc
tttacaatgggtatcattggactagggcttttgctttttgcgcggcttatcggtaatatg
cagaacttccttcaatctcttgatcggaggaggatggaaatgatgctgagacggcgtgat
gtagagcagtggatgagccacagactgttgccagaagatataagaaaaagagtgcgggag
gctgagcggtacaattgggctgcgactagaggagttaacgaagaatttctattcgagaac
atgcctgatgaccttcaaagagatataagacgacacctctttaaatttctcaagaaggtg
agaatattttcgttgatggatgaatcagttttagattcaatccgtgagaggctgaaacag
aggacatacataaggagtagcacggtgttgcaccgcagaggtctagtagaaaaaatggta
ttcatagtgagaggtgagatggagagcattggagaagacggttctgttcttcctttatca
gaaggcgacgtttgtggtgaagaacttctcacttggtgcctcgaacgctcttctataaac
cccgatgggactaagataaagatgccaacaaagggattagttagcaacagaaatgttagg
tgtgtgacaaacgtggaagcgttttcgctgagtgtagcagatcttgaagatgtaacaagc
ttgttttcaagattcttaaggagtcatcgagtgcaaggagctataaggtacgagtctcct
tattggagactacaagcagcgatgcagattcaagtggcttggagataccgaaagagacga
cttcagagattttacactgctcagtctagttccaacaattag
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