KEGG   Arabidopsis lyrata (lyrate rockcress): 9321347
Entry
9321347           CDS       T01578                                 
Name
(RefSeq) ras-related protein RABG3f
  KO
K07897  Ras-related protein Rab-7A
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04144  Endocytosis
aly04145  Phagosome
aly04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    9321347
   04145 Phagosome
    9321347
   04148 Efferocytosis
    9321347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9321347
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9321347
   04031 GTP-binding proteins [BR:aly04031]
    9321347
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    9321347
Exosome [BR:aly04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   9321347
  Exosomal proteins of other body fluids (saliva and urine)
   9321347
  Exosomal proteins of colorectal cancer cells
   9321347
  Exosomal proteins of bladder cancer cells
   9321347
GTP-binding proteins [BR:aly04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    9321347
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 RsgA_GTPase AAA_16 nSTAND3 AAA_22 AAA_7 Septin cobW PduV-EutP AAA_24 NTPase_1 ATPase_2 SRPRB MCM NACHT AAA_14 ATP-synt_ab
Other DBs
NCBI-GeneID: 9321347
NCBI-ProteinID: XP_002883153
UniProt: D7L955
LinkDB
Position
Unknown
AA seq 206 aa
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF
VLIGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEEAFQCIAKNALKSG
EEEELYLPDTIDVGTSNQQRSTGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgccgtcccgtagacgtactctcctcaaagtcatcatcctcggtgatagcggggtggga
aaaacctctttgatgaatcaatatgttaataaaaagttcagcaaccagtacaaggcaacc
attggagctgatttcttgaccaaggaagtacagtttgaagatcgacttttcactttacag
atctgggatacagctggacaggaaaggtttcagagccttggtgtagctttttaccgtggt
gctgattgctgtgttcttgtatatgatgtcaactccatgaaatcatttgaaaatctgaac
aactggagggaagaatttctgatccaggcgagtccatcagatccagagaattttccattt
gttcttatcggaaacaaggttgacgttgatggtggaaacagcagagtggtttcagagaaa
aaggctaaagcttggtgtgcttcaaaggggaacattccttactttgagacctctgccaag
gaaggtactaatgtggaggaagctttccaatgcattgccaagaacgcgttgaagagcgga
gaagaagaagagctatacttgccagacacaatcgatgttggtacgagcaatcagcagagg
tctacagggtgtgaatgctaa

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