Arabidopsis lyrata (lyrate rockcress): 9321385
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Entry
9321385 CDS
T01578
Name
(RefSeq) probable beta-D-xylosidase 5
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00520
Amino sugar and nucleotide sugar metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
9321385
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
9321385
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Paralog
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Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
PRMT_C
Motif
Other DBs
NCBI-GeneID:
9321385
NCBI-ProteinID:
XP_020887491
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MSVGRFVGVSLLIAALVSSLCESQKNFACDRNDPATAKYGFCNVSLSYEARAKDLVSRLS
LKEKVQQLVNKATGVSRLGVPPYEWWSEALHGVSDVGPGVRFNGTVPGATSFPATILTAA
SFNTSLWLKMGEVVSTEARAMHNVGLAGLTYWSPNVNIFRDPRWGRGQETPGEDPLVVSK
YAVNYVKGLQDVQDAGKSRRLKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQ
PPFKSCVEEGDVSSVMCSYNRVNGIPTCADPNLLRGVIRGQWRLDGYIVSDCDSIQVYFD
DIHYTKTREDAVALALKAGLNMNCGDFLGKYTENAVKLKKLNGSEVDEALIYNYIVLMRL
GFFDGDPKSLPFGQLGPSDVCSKDHQMLALEAAKQGIVLLENRGDLPLSKTAVKKIAVIG
PNANATKVMISNYAGVPCKYTSPLQGLQKYVPEKVVYEPGCKDVNCGEQTLISAAVKAVS
EADVTVLVVGLDQTVEAEGLDRVNLTLPGYQEKLVRDVANAAKKTVVLVIMSAGPIDISF
AKNLSTISAVLWVGYPGEAGGDAIAQVIFGDYNPSGRLPETWYSQEFADKVAMTDMNMRP
NSTSGFPGRSYRFYTGKPIYKFGYGLSYSAFSTFVLSAPSIIHIKTNPILNLNKTTSIDI
STVNCHDLKIRIVIGVKNRGQRSGSHVVLVFWKPPKCSKTLVGAGVPQTQLVGFERVEVG
RSMTEKVTVEFDVCKALSLVDTHGKRKLVTGHHTLVIGSNSDQQIYHHLNVRLAGDSTVS
I
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaggaagatttgtgggtgtctctctgctaatagcagctctagtttcatcacta
tgcgagtctcaaaagaactttgcgtgtgacaggaatgaccctgcgacggctaagtatggt
ttctgcaacgtctcgttgtcgtatgaagcccgtgccaaagatttggtctcacgtctctcc
cttaaggaaaaggtccagcaactcgtaaacaaagccacgggagtttcaaggctcggtgtt
cctccgtacgagtggtggtcagaagctctccacggcgtctccgacgttggaccaggggtg
cgtttcaacgggacggtgcctggagcgacgagtttcccggcgacgatattaacggcagcg
agctttaacacatcgttgtggctaaaaatgggagaagtggtttctacggaggctcgagcg
atgcacaacgtaggactagctggactcacctattggagtcccaacgttaacatatttaga
gatccaaggtggggtcgtggccaagagacgccaggggaggaccctctcgttgtttcaaag
tatgccgtgaattacgtcaagggcttacaagacgttcaggacgcaggaaaatcacggcgg
cttaaggtttcgagttgttgcaagcattacactgcttatgatcttgataactggaaaggc
atcgatagattccacttcgatgccaaggtaacgaagcaagacttggaagacacgtatcag
ccgccattcaagagctgtgtagaggaaggagatgtgagcagtgtaatgtgttcttacaac
agagttaatggtatcccaacttgtgcagaccctaatcttcttcgtggagttatccgaggc
caatggcgtcttgacgggtacatcgtttcggattgtgattctatccaggtctatttcgac
gacattcattacaccaagacacgtgaagacgcagttgctctcgccctcaaagcaggtttg
aacatgaactgtggagattttctaggtaagtacacagagaatgcagtgaagcttaagaaa
ctgaacggatcagaggttgatgaagcgctgatttacaactacattgttctcatgaggctc
ggattctttgacggagatccaaaatcacttccctttggtcaacttggaccgtctgatgtc
tgcagcaaggaccatcaaatgcttgcgctagaagcagcaaaacaggggattgtactgctt
gagaacagaggagatcttccgttatcgaagaccgcggttaagaaaatagcagttataggg
ccaaatgcaaatgctacaaaggtaatgattagtaactatgcgggtgttccttgtaagtac
acaagccctttacaagggctgcaaaagtatgtaccggaaaaggttgtttacgaaccgggg
tgtaaagatgtcaactgtggtgagcaaacactaatttcagcagcggtcaaggcggtttca
gaggctgatgtgacagttttggtggttggattggatcagacggtagaggcagagggtctt
gaccgggttaacttaacccttccgggttaccaagaaaagctggtgagagatgtggctaat
gctgcaaaaaaaactgttgtgttggtcataatgtcagccggacctatagatatctcattc
gccaagaatctgagcacgattagcgcggttttatgggttggatatcctggtgaagctgga
ggagacgctatagctcaagtcatatttggtgactacaatccttctgggagactaccagag
acatggtactcacaagagtttgcggataaggttgcaatgacggacatgaacatgcggcct
aactcaacctctggttttcctggaagatcttacagattctacacagggaaaccgatttac
aagttcggatacgggcttagctactctgctttctcgactttcgttctctcagctccatcg
atcatacacatcaaaaccaatccaatcttgaacctaaacaaaacaacctctatcgatatc
tccaccgtaaattgccacgatctcaagatccggatcgttatcggggtcaagaaccgcggg
caacggtctggaagccacgtggtgctcgtgttctggaaaccgcctaagtgttcaaaaact
ctggtgggtgctggcgtgccacagacgcaattggtaggatttgagagagtagaagttggg
agaagcatgacagagaaagttaccgttgagtttgatgtctgcaaagcacttagccttgtg
gatactcacggtaaaaggaaactagtcaccggacaccacacgcttgttattggttctaac
agtgatcaacaaatctatcatcatctcaacgttagattggccggagattcaacggtttct
atctga
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