Arabidopsis lyrata (lyrate rockcress): 9321651
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Entry
9321651 CDS
T01578
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9321651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9321651
Membrane trafficking [BR:
aly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
9321651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Zn_ribbon_bTOP1
Motif
Other DBs
NCBI-GeneID:
9321651
NCBI-ProteinID:
XP_020889060
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MAETANTDLEGIDGVRMTWNVWPRSKVEASKCVIPLAACISPIRRHSDIPTLPYAPLRCR
TCSAALNAYAQVDFTAKLWICPFCYQRNHFPPHYHVISETNLPGELYPQYTTVEYTLPPP
VAGQFDPRNGEVPSQAVFVFVLDTCMIEEELDFAKSALKQAIGLLPENALVGFVSFGTQA
HAHELGFSEMSKVFVFKGDKEISKDQILDQLGLEGSSRRYTKGAQNGVPSSGLNRFLLPA
SECEFTLNSLLDELQSDQWPVQPGHRSQRCTGVALSVAAGLLGACLPGTGARIVALIGGP
CTEGPGTIVSKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVTQGHVLDLFASALD
QVGVAEMKVAIERTGGLVVLSESFGHSVFKDSFKRVFEDGDQALGLCFNGTLEICCSQDI
KIQGAIGPCSSLEKKGASVADTVIGEGNTSAWRLCGLDKTTCLTVFFDISSSGSNTPGAA
NPQFYLQFLTSYQNPEGQTLLRVTTVCRQWIDSAVSSEELVQGFDQETAAVVMARLASLK
MESEEGFDATRWLDRNLIRLCSKFGDYRKDDPASFTLNPYFSLFPQFIFNLRRSQFVQVF
NNSPDETAYFCMLLNRENISNATVMIQPSLTTYSFNSPAEPALLDVASIAADRILLLDAY
FSVVVFHGMTIAQWRNMGYHHQPEHQAFAELLQAPQEDSQMLVRERFPVPRLVVCDQHGS
QARFLLAKLNPSATYNNANEMSTGSDVIFTDDVSLQVFFEHLQKLVVQS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacggcgaatacagatctagaaggaatcgatggagttcgtatgacatggaac
gtttggcctcgttcaaaagttgaagctagcaaatgcgtgatcccactcgccgcttgcatt
tctccgatccggcgacattccgatatccctacccttccttacgcaccgctccgatgccgg
acttgttccgcagcgttaaacgcttacgcacaagtcgatttcaccgcaaagctttggatc
tgtcccttttgttatcagcgtaatcatttcccgcctcattatcatgtgatctctgagact
aatcttcctggtgagctttatcctcagtatactactgttgaatacacgcttcctccgcct
gttgctggtcaatttgatccgaggaatggggaagttccgtcgcaggcggtgtttgtgttt
gttcttgatacttgtatgattgaagaagaattagattttgctaaatcggcgcttaaacag
gcgattggattgcttccggagaatgctttggttggatttgtgtcgtttggtactcaggct
catgcgcatgaattgggattctctgagatgtctaaggtttttgtttttaaaggagataaa
gagatttctaaagatcagattttggatcagttggggcttgaaggttcttcaaggagatat
acgaaaggagctcaaaatggcgtcccgagttctggtttgaatagattcttgttacctgct
tccgagtgcgaattcacactcaactcgcttttggatgagctacaaagtgatcagtggcct
gttcagccaggtcatcggtcccaacgatgcacaggtgtggcattgagtgttgctgcagga
ttgcttggagcttgcttgcctggaactggggctagaattgtagctttgatcggaggtcca
tgtacagaaggccctggaacgattgtctcaaaagatttatcggatcctgtgcgatctcac
aaagatctagataaagatgccgctccttactataaaaaggctgtcaagttttatgatagc
atcgcaaagcaactagtcactcagggtcatgtgctagacctttttgcttctgcacttgat
caggttggggttgctgagatgaaagttgcaattgaaagaactggtggccttgttgttctg
tctgaaagttttggccattccgtattcaaagattccttcaagcgagtatttgaagatggc
gaccaggctcttggcctctgctttaatgggacgcttgagatctgttgttcacaggacatc
aaaattcaaggggctattggaccatgctcatcattagagaagaaaggggctagtgttgct
gatacggttatcggagaggggaatacttctgcttggaggttgtgtggccttgataaaact
acgtgtttgacagtattttttgacatatcttcaagcgggtcaaatactcctggagctgcg
aatccacagttttatttgcagtttctcacaagttaccaaaaccctgaaggtcaaacattg
ctccgagttactactgtatgcagacagtggatagacagtgctgtgagttcagaggaactt
gtgcaaggctttgatcaagaaactgctgctgtggtcatggctagattagcttctttgaaa
atggagtcagaggagggatttgatgctactcggtggttagatcggaatctcattcgtctt
tgttcaaagtttggagactatagaaaggatgatccagcctccttcacactgaatccctat
ttttcgttatttcctcaatttatatttaatctgcggcgatcgcagtttgttcaggtattt
aacaatagccctgatgaaaccgcatacttctgcatgttattaaaccgggagaatatttcg
aatgcaactgtcatgatccaaccgtcgttgacaacatattcattcaattcaccagccgaa
ccagctttgctagatgtggcttccattgcagccgatcgaattcttttattagatgcatat
tttagtgttgttgtcttccatggaatgactatagcacaatggcgaaatatgggttatcat
catcagcctgaacaccaggcttttgctgagttattgcaagctcctcaagaggattcccag
atgctagtccgtgagcgtttccctgtcccaagattagttgtctgtgatcagcacggctcg
caggcaaggtttttattggcaaagctgaatccatcagcgacgtacaacaatgcaaacgaa
atgtcgacagggtcagatgtgatattcacagacgacgttagccttcaagtcttctttgaa
catcttcagaagctggtagtgcagtcttga
DBGET
integrated database retrieval system