Arabidopsis lyrata (lyrate rockcress): 9321856
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Entry
9321856 CDS
T01578
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9321856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9321856
03036 Chromosome and associated proteins [BR:
aly03036
]
9321856
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
9321856
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
9321856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
9321856
NCBI-ProteinID:
XP_020886020
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MFSPLTKRAKQSSRNRVAPPDSPVTPATQNRNNFISDRPATGTPAPWAPRLSVLARVSPG
NNGERGDDSDQLKPVFVGEFPQLLRDEQSYPGDACVSGGMDKETCLSWFITGSKLFVWSH
LTTLPSRKCVVLELPVGVLVNEESGSGLQDGKSWLISVVSWDTSAGAATRAARSRSPVGV
VMCNRKTRAVVYWSDIFSGQEAAPVTSLGSSDESVVYSSPVGRKSSAFNKRQSNGIRSSR
AEYSNLNSLITTAVATAERLCIAIACSSNGELWQFTCSPTGVKSNQVQLNISSSSVSEGY
PRSLIWRFSQGLARESCWEFFMLTDCDIHCFTIEPYPDLTVSKVWQHEIVGTDGDSGIKK
DIASQKQIWPLDLQVDQGKVITVLVATICMDRASSSSYTQYSLLTLQQKSEMRFADGREE
KVLEKQAPIQVIIPKARVEDKDFLFSMKLRVGGRPPGSAIILSGDGTATVCYCHGSSTRL
YKFDLPYDAGKVLDASVLSSTDEHEYGAWTVLTEKAGVWAIPEKAVVLGGVEPPERSLSR
KNSSNERSTRDETRITPYGIDRTAGKENSDIQNSGDKGNPKMGFTRQTAREEESEALLGQ
LFEGFLLSGKVDGSLEKLSQSGAFDRDGETNVFARKSKSIVDTLAKHWTTTRGAEIVAMT
VISSQLVEKQQKHENFLHFLALSKCHEELCSKQRHSLQIILENGEKLAAMIQLRELQNMI
NQNRSARFGSPQAGSEDQVSCALWDLIQFVGERARRNTVLLMDRDNAEVFYSKVSELEEV
FYCLNRQLEYIIRADQPLGTQVQRACELSNACVTILQTALDYKNEHQMWYPPLEGLIPWH
CQPVVCNGLWCIASFMLHLLTEASRIDISAKSDIYMHLEVLTEVLLEACAGSTFAKLERE
EENKGLLSEYWTRRDTIFDSLYQQAKEFMEAEIQGIRERTETTDEDIFRNRCSNLISIAK
RHAGYKIMWKICYDLNDTGLLRNLMHEGVGPQGGFSYFVFQELYDMKQFSKLLRLGEEFQ
DELLIFLKRHSDLLWLHQVFLHQFSSASDTLHTLALAQDEESMTTNEERTVPEPEDAQPT
FADRKRFLNLSKIAYVADKDADSESKVKRIEADLNLLKLQEEITKALPNGEARNRLFRPE
ELIEICLNIQGRWTAIKAFEVFAWTSGSFCDNHKSLLEECWRNAADQDDWDRLHQASTNE
GWSEKETLQNLRNTALFQASKRCYGPTRINSFDGDFAQVLPLRRENPEDSTSSVEDVLMS
HKDFAEAGKLMLTAIMLGCVEEEGIVAEEFASPME
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccattgacgaagagagctaagcaaagctcacgcaatcgagtcgctccaccg
gattctccagtaactccggcaactcaaaatcggaacaatttcatctcagatcgtcccgcc
actggaactcctgctccttgggctcctcgtttatctgttctcgctagagtttctcctggg
aacaatggtgaaagaggagatgattcagatcaattaaagcctgtattcgttggagagttt
cctcaattgttgcgagatgaacaaagttatcctggtgatgcttgtgtatctggtggaatg
gataaagaaacgtgtctttcttggtttattactggaagtaaactttttgtatggagtcat
ttgacgacgttaccgtcgagaaaatgtgttgttcttgaacttcctgttggtgttttggtt
aatgaagagtctggtagtggtttacaagatgggaaaagttggttgattagtgttgtgtct
tgggatacttctgctggtgcagctacgagggctgctcgctctcgtagtcctgttggtgtt
gttatgtgtaacagaaaaactcgagctgttgtgtattggtcagacatcttttctggtcag
gaagctgcccctgttactagtcttggatcttcggatgaaagtgttgtgtatagttcacct
gtaggtagaaaaagctcagcatttaacaagcgacaaagcaatgggattagaagcagtaga
gctgaatatagcaatctcaattctttgattactactgcagttgctacggctgagcgcctt
tgtattgctattgcttgcagttctaatggtgagctatggcaatttacctgtagccctaca
ggcgttaaaagtaatcaagtgcagttgaacatcagctcttcctctgtaagtgaggggtat
ccaaggtccttgatctggcggttttcgcaaggattggcaagagagtcgtgttgggaattt
tttatgttgacagattgtgacatacattgttttactattgaaccttatcctgatctgact
gtttcaaaagtctggcaacatgagattgttggcactgatggtgattctggtatcaagaaa
gatatagcaagtcaaaagcaaatttggcctctagatttgcaggtagatcagggtaaagtg
attacagttcttgttgccactatctgcatggaccgcgccagcagttctagctatacacaa
tattcgcttttaaccttgcaacagaaatctgagatgagatttgctgatgggagagaggaa
aaggttctggagaaacaagctccaatccaagtcataatcccgaaagcaagagtggaagat
aaagacttcttattctctatgaaacttagagttggtggtaggcccccagggtcagctata
attctttcaggtgatggaacagctacagtttgctactgtcatggaagttctacacggctc
tataagtttgatttaccttatgatgctggcaaggtcttggatgcttcagttctttcctca
actgatgaacatgaatatggtgcatggactgtgctaactgagaaagcaggagtgtgggca
ataccagagaaagcagttgtgcttggtggagtcgaacctccagagagaagtctgtcacgc
aaaaatagctccaatgagaggtctacacgagatgagacaaggataacaccatatggcatt
gatagaactgccgggaaggagaattctgacatacagaatagtggagacaaaggaaaccct
aaaatgggattcactcgtcaaacagcccgtgaggaggaatcagaagctttgcttggccag
ctctttgagggttttctgttatctgggaaagttgatggatccttggagaagcttagtcaa
tctggtgcatttgatagagatggagaaaccaatgtttttgctcgcaaaagcaaatctata
gtcgacacattagctaagcattggacaacaactagaggggctgagatagtagctatgact
gttatatcttcacaattggttgagaaacaacagaagcatgagaattttctacactttctt
gctctatcgaaatgccatgaggagctgtgttctaaacagagacattctttgcaaataatt
ctggaaaatggtgaaaaacttgctgccatgattcaactccgggaactgcagaatatgatt
aaccagaaccgctcagctagatttggctcgccgcaggctggctcagaggatcaagtttca
tgtgccctttgggatcttattcaatttgtaggggagagagcccggcgaaatacagttctt
ttgatggacagagataatgctgaagttttctacagcaaggtatctgaacttgaggaagtg
ttttattgtctgaacaggcaactagaatacataatcagagctgaccaaccactgggaact
caagtgcagagagcctgcgaactctcaaatgcatgtgttacaattcttcagactgcctta
gattacaaaaatgagcatcaaatgtggtatccaccacttgaaggtttaataccttggcac
tgtcagcctgttgtatgtaatggactgtggtgcattgcgtcctttatgcttcatctgtta
actgaggcatctaggattgacatctctgctaaatcagatatatacatgcatctcgaagtg
cttactgaagttttacttgaggcctgtgccggttctacctttgcaaaattggagagggaa
gaggagaacaaaggtttgcttagtgagtactggactcggcgggatactatttttgactct
ctgtatcaacaagcgaaagagtttatggaagcagaaatccagggcatcagagaaagaact
gaaacgacagatgaagatatcttcagaaaccgttgttcaaatttgatttccattgcaaag
cgacatgcaggctataaaattatgtggaagatatgttatgatcttaatgatacaggactg
ctcagaaacctgatgcacgaaggtgtgggaccgcaaggagggttcagttactttgtgttc
caggaactctatgatatgaaacagttctctaagcttctacggcttggggaagaattccag
gacgagctattgatatttctaaagcgccattctgatctgctgtggcttcatcaggtgttt
cttcatcagttctcatctgcttctgacactcttcatacattggctctagcacaagatgaa
gagtctatgacaactaatgaagaaagaaccgtgccagaacctgaagatgcacaaccaaca
ttcgcagaccgcaagcggtttctgaacctttcaaagatagcctatgtggcagacaaggat
gctgattccgaatcgaaagtgaagcgcattgaagctgatctcaacttactgaagctgcag
gaagaaataacaaaagctttgccaaatggagaagcaagaaaccggctgttccgaccagag
gagctcattgaaatctgtctcaatatccagggccgatggacggctataaaggctttcgag
gtgtttgcatggacgagcggttcattctgtgataatcataagagtctcttagaagaatgc
tggagaaatgctgcggatcaagacgactgggacaggctccatcaagcctctactaatgaa
ggttggagcgagaaagaaacattacagaatctaaggaacacagcccttttccaggcttcc
aaaagatgttacggaccaacccgaatcaactcttttgatggagattttgcacaagtcctt
cccctgagacgagagaaccctgaggattcaacttcttccgtagaggacgtgttgatgagc
cacaaagatttcgctgaggcggggaaacttatgctaaccgcaatcatgctgggttgtgta
gaagaagagggtattgtagcagaagagttcgcatctccaatggagtag
DBGET
integrated database retrieval system
