Arabidopsis lyrata (lyrate rockcress): 9321938 Help Entry 9321938           CDS       T01578                                  Name (RefSeq) protein CHROMATIN REMODELING 5   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism aly  Arabidopsis lyrata (lyrate rockcress) Brite KEGG Orthology (KO) [BR:aly00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aly03021]     9321938    03036 Chromosome and associated proteins [BR:aly03036]     9321938 Transcription machinery [BR:aly03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      9321938 Chromosome and associated proteins [BR:aly03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      9321938     SLIK complex      9321938 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom HTH_Hrp3 Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD Chromo_MIT1 SWI2_SNF2 Motif Other DBs NCBI-GeneID:  9321938 NCBI-ProteinID:  XP_020886347 LinkDB All DBs Position Unknown AA seq 1735 aa AA seqDB search MAFFRNYSNDTVSHNVLDENEERQNAATFQSSPLNEDVDGTYSERGFDMNMDVQYQSDPE PGCSIRQQNEPPIDNVAGPVDSHYQPSTRRLGVTGRWGSTFWKDCQPMGQREGSDPAKDS QSGYKEAYHSEDNLSNDRSEKLDSENENDNDEDNEMNKHQSGQADVPADEMLSDEYYEQD EDNQSDHVHYKGYSNPTNSRSLPKAGSATHSNSRASRAIHKNIHFSDSNHGHNGDADMDY EEEEDEDDPEDADFEPYDDAVDDGGASKKHGQGWDVSDEDPESDDEIDLSDYEDDYGTKN PKRQQSKGFRKSSTGLERKSSTGLERKSFHASSRQKRKTSYQDDGSEEDSENDNDEGFRS LARRGTTLRQNNGRSTNNIGQSSEVRSSTRSVRKVSYVESEDSEDKDDGRNRKNQKDDIE EEDPDVIEKVLWHQLKGMGEDVHTNNKSTVPVLVSQLFDTEPDWNEMEFLIKWKGQSHLH CQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSKEMDLDIIKQNSQV ERIIADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDITFAQVAIDEYKAREVSIAVQ GKMVEQQRTKGKASLRKLDEQPEWLSGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLG KTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVC QQYEFYNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTA LLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANL HLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQV SLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETK HRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLST RAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILE RAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKEDKNDEESK KRLLSMDIDEILERAEQVEEKHTDETEHELLGAFKVANFCNAEDDGSFWSRWIKPDSVVT AEEALAPRAARNTKSYVDPSHPDRTSKRKKKGSEPPEHTERSQKRRKTEYFVPSTPILEG TSAQVRGWSYGNLPKRDAQRFYRTVMKFGNHNQIACIAEEVGGVVEAAPEEAQVELFDAL IDGCKESVETGNFEPKGPVLDFFGVPVKANELLKRVQGLQLLSKRISRYDDPISQFRVLS YLKPSNWSKGCGWNQIDDARLLLGILYHGFGNWEKIRLDESLGLTKKIAPVELQHHETFL PRAPNLKERATALLEMELAAAGGKNTNAKASRKNSKKVKDNLINQFKAPARDRRGKSGPA NVSLISTKDGPRKTQKAEPLVKEEGEMSDDGEVYEQFKEQKWMEWCEDVLADEIKTLGRL QRLQTTSADLPKEKVLFKIRRYLEILGRRIDAIVLEHEEDLYKQDRMTMRLWNYVSTFSN LSGDRLNQIYSKLKQEKEEEEGVGPSHLNGSSAGFGSRNFQRQQKYKTAGNSQGSQQVHK GIDTAKFEAWKRRRRTENDVQTERPLITNSNSLGILGPGPLDRSHRARQTGFPPR NT seq 5208 nt NT seq  +upstreamnt  +downstreamnt atggctttctttaggaactactcaaacgatactgtgtcacataatgttcttgatgaaaat gaggagcggcaaaatgctgctacttttcagagttcacctttgaatgaagatgtggatgga acttatagtgaaagaggctttgacatgaacatggacgtacagtatcaaagtgacccagaa ccaggatgtagtattaggcagcaaaatgagccaccaattgataatgtagctggtcctgtg gattcccattatcaaccttcgacaaggagattgggtgtaactgggaggtggggttccaca ttttggaaagactgtcagccaatgggacagagagagggctctgatcctgccaaagattca caatccggttacaaagaagcatatcattctgaagataatctctcaaatgaccggagtgaa aagttagattctgaaaatgaaaatgataatgatgaggataatgaaatgaacaagcatcaa agtggtcaagctgatgtcccagcagatgaaatgttgtctgatgaatattatgaacaggat gaagataatcaaagcgaccatgtgcactacaaagggtatagtaatcctacaaattctaga tcactgccgaaggcaggatctgctacccatagcaactcaagggcctcaagagcaattcac aaaaacattcactttagtgatagtaatcatggccacaatggtgatgctgatatggactat gaagaggaggaagatgaggatgaccctgaagatgctgactttgagccctatgatgatgct gttgatgatggtggtgcaagtaaaaagcatggccaaggttgggacgtttctgatgaagac cctgagagtgatgatgaaattgatctttccgattacgaggatgactatggcacaaaaaac cccaagaggcaacaaagtaaaggtttccggaaatcaagcactggactcgaacggaaatca agcactggactcgaacggaaatcattccatgcttctagtcgacaaaagaggaaaacatca tatcaagatgacggctcagaggaggactctgaaaatgacaatgatgagggttttagaagc ctggccagaagaggcacaactctccgacaaaacaatggaaggtcaaccaataacatagga cagagtagtgaagttcgcagctccacccgatcagttcgtaaagtctcttatgtagagagt gaagacagtgaagataaagatgatgggagaaatcgtaaaaaccaaaaggatgacattgaa gaggaggatcctgatgttattgaaaaagtgctctggcatcagctgaagggtatgggtgaa gatgttcacacaaataacaaatcaacggttcctgttctagtaagccaactgtttgatact gagccagattggaatgaaatggaattccttataaaatggaaaggccaatcacacttgcat tgtcagtggaaaacgttgagtgatctccaaaatcttagtgggttcaagaaggttcttaat tatacgaagaaagtgacggaggagattaggtacaggacagcactctcgcgagaggagatt gaggtcaatgatgtgagcaaagaaatggatctggacatcattaagcagaatagtcaggta gaaagaataattgcagatcgaataagcaaagatggtttaggtgatgttgtgccagagtat ctagttaagtggcaagggctatcttatgctgaagcaacttgggagaaggatgtcgatata acatttgcacaagttgctattgatgagtacaaggctcgtgaagtttcaattgcagtgcaa gggaaaatggtggaacagcagcgtacaaaaggaaaagcaagcttgaggaagcttgacgag cagcctgagtggctaagtggaggtacgctacgggactatcagctggagggtttgaatttt cttgtcaacagctggcttaatgatactaatgttattttggctgatgaaatgggtcttggt aaaactgttcagtcagtttcaatgcttgggtttttgcagaatacccaacaaattcctggt ccatttcttgttgttgtgcctttgtcaacactagctaattgggcaaaagaatttagaaag tggcttcccggcatgaatataatagtatatgttggcacccgggctagtcgagaggtatgc cagcaatacgaattttacaatgaaaagaaagtaggcaggcccataaaattcaatgcactt ttgaccacttatgaagtagttctgaaagataaagctgtcctctccaagattaagtggatt tacttaatggtggatgaagcacatcgactgaaaaatagcgaggcacagctctacacagct cttttggaatttagcacgaagaacaaattgcttattactggtactccactacagaatagt gttgaagagctttgggctctgctccactttcttgatcctggaaagtttaagaataaggat gagttcgttgaaaactacaagaaccttagctcatttaatgaatctgagctcgccaacctt catttagagttgagaccccatattctacgacgagtgattaaagatgttgaaaagtcgttg cctccaaaaatcgagcgtatactaagagttgagatgtcccctcttcagaaacagtactac aaatggatactggagcgcaacttccatgatttaaataaaggggtgcgcggtaatcaggtt tcacttttaaacatcgtggtggagttgaagaaatgctgcaatcatcctttcttatttgaa agtgcagaccatggatatgggggtgacataaacgataactctaagctggataaaattatt ctaagcagcggaaagctagttatcctagacaagctactggttagactgcgagagactaag catcgtgtgcttatcttttctcagatggtaagaatgttagatatcctggcggaatacctg tctcttaggggtttccagttccagagactggatggtagtactaaagcagaactgcgtcag caagcaatggatcattttaacgcacctgctagtgacgacttttgctttctcctttcgacc cgagctggtggactgggtatcaatcttgctactgctgatacagtcgttatatttgactct gattggaatccacagaatgacctacaggccatgagtcgagcgcacagaattgggcaacaa gaggtcgtgaacatttatagatttgtcactagcaaaagtgttgaagaagagatcctggag cgcgccaaaagaaaaatggttcttgatcatttggttattcaaaaactgaatgcggagggt aggctggagaagcgagaaacgaaaaagggaagtaattttgacaagaacgagctttctgca atattgagatttggagctgaagaactttttaaagaggataaaaatgatgaagaaagcaaa aagcggttgttgagtatggatattgatgaaatcttagagagggcagagcaagttgaggaa aagcatactgatgaaacagaacacgaattgttgggtgcttttaaggttgccaacttttgc aatgctgaagatgatgggtccttctggagtcgctggataaaacctgattctgtggttacg gccgaagaagctcttgcaccacgggctgctaggaatacgaagagttatgtggatcctagc catcctgacaggactagcaaaagaaaaaagaaaggatctgagcctccggagcatacagag agaagtcaaaagcgcagaaaaactgaatattttgttccttcaactccaatattagagggg acttcagctcaagtgagaggctggtcttatggaaatcttcctaagagagatgcgcaacga ttttatcgaactgtcatgaagtttgggaaccataatcaaattgcatgtattgcagaggag gtgggtggtgttgttgaagcagccccggaagaagcacaagttgagctatttgatgcttta attgatggttgtaaggaatctgttgaaacaggaaattttgaaccaaagggtcctgtgttg gatttctttggtgtgccagttaaagcaaacgaactattaaaacgtgtgcaaggactgcag ctcctatcaaagcgcattagtcgatatgacgatccaatttcacaattccgggtgttgtca taccttaaaccttcaaattggtccaagggttgtggttggaatcagatcgatgatgcgaga ttgcttcttggaatactttatcatggttttgggaattgggaaaagataagattagatgag agccttggacttacaaagaagattgctcctgttgaacttcaacaccatgagacttttcta cctcgtgctccaaacttaaaggagcgtgccactgcacttctggaaatggaacttgctgca gcaggagggaaaaacacaaatgccaaagcatcccgtaaaaattccaaaaaggttaaggat aatcttatcaatcaatttaaagcacctgccagagaccggagaggaaaatctggtcctgcc aatgtaagtttaatatcaacaaaagatggacctcggaaaacccaaaaagctgagccgttg gtgaaggaagaaggggaaatgtctgatgatggggaagtttacgagcagttcaaggagcag aaatggatggaatggtgtgaagatgtcttggccgatgaaatcaaaactcttggacgtcta caaagattgcaaaccacaagtgccgatctgccaaaggagaaggttcttttcaaaatccgg agatatttggaaatccttgggcgaagaatagatgcaattgtcttagaacatgaagaagat ttatacaagcaagatagaatgacgatgagattgtggaactatgtctcaactttctcaaat ttgtcgggggatcgactcaatcagatctactccaaattgaagcaggagaaagaagaagag gaaggggtcggaccatcgcacctcaatggctcatccgctggctttggttctaggaacttc cagaggcaacaaaaatacaaaacagcagggaactcccaaggatcgcagcaggttcacaag ggcattgacacagcaaagtttgaagcgtggaaacggagaagaagaacagaaaacgatgtt cagactgagcgaccactgataacaaactctaactctctgggaatactcggccctggacca ttggatagaagccatagggcacgtcaaactggatttcccccaagataa

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