Arabidopsis lyrata (lyrate rockcress): 9321978
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Entry
9321978 CDS
T01578
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9321978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9321978
03041 Spliceosome [BR:
aly03041
]
9321978
03032 DNA replication proteins [BR:
aly03032
]
9321978
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
9321978
Spliceosome [BR:
aly03041
]
Complex A
U1 snRNP components
Sm proteins
9321978
U2 snRNP components
9321978
Complex B
U1 snRNP components
9321978
U4/U6.U5 tri-snRNP components
9321978
Complex C
U2 snRNP components
9321978
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
9321978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF7688
Motif
Other DBs
NCBI-GeneID:
9321978
NCBI-ProteinID:
XP_002885912
UniProt:
D7L1S4
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL
GEILIRCNNVLYVRGVPEDEELEDADQD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctaccataccagtaaacccgaaaccattcttgaacaacttgaccgggaagacggtt
atcgttaagcttaaatggggaatggaatacaaaggttttctcgcttctgttgactcctac
atgaacttgcagctgggaaacaccgaggaatacatcgatgggcaattgacaggaaacctt
ggagagatcttgatcagatgcaacaacgtcttgtatgtccgaggcgtgccagaagatgaa
gaacttgaagatgctgatcaagactaa
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integrated database retrieval system
