Arabidopsis lyrata (lyrate rockcress): 9322153
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Entry
9322153 CDS
T01578
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9322153
Spliceosome [BR:
aly03041
]
Common components
Common spliceosomal components
General mRNP proteins
9322153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
9322153
NCBI-ProteinID:
XP_020889374
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGRERSRSSRHRGDEKKERDEDEDGRR
SKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDIDKEERNGKDRERDRDKDRDGKGRDH
EKDRERDRSRRSRSRSERHRSQEREKSLEIEPKERETKDRDRDRRRHKDKKEDKVEPEAD
PERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSV
PMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINM
SEDDLRKVFEPFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIK
VSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAAS
IHGGVSTISSLAAPALVQGSFPAVAGLAGAGIIPGVIDPVGVPSECLLLKNMFDPSTETE
DDFDKDIEEDVKEECSKFGNLNHIYVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKM
ITATYMTTVAYEAKFPESKVG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggactttgatgagtatgagtacctagagaagacagttgaaaatccccacttggagaat
gaagttgggaatggtggtggtgatgagaaagtcaaatctgaagggagagagcggagtaga
agctcaaggcataggggtgacgagaagaaggagagggatgaagacgaggatggtcggcgt
tctaagcggtcgagatctcaccaccgttcacggtctagggacagagagagggataggcat
aggagtagccgggagcacagagatagagatcgtgaaaaggatatagataaagaagaaaga
aatgggaaagatagagagagggacagagataaggatcgagatggtaaagggcgtgaccat
gaaaaagatagggagagagatcggtcacgaaggagtagaagtcgatcagagcgacatcgg
agtcaggaaagagaaaagagcctggaaatagaacctaaggaaagagagaccaaggaccgg
gatagagatcgcagacgccataaagataagaaggaggataaggtagaacctgaggctgat
ccggaaagagatcagagaacagtttttgcttatcagattgctttgagagcaacagaaagg
gatgtttatgaattcttttctagagctggcaaggtgcgagatgtacggataataatggat
cgaatttccaggcgttccaggggaatagggtatgtggagttttatgatacaatgtctgtc
cccatggctattgctctatctggacaacctcttcttggtcagcctgttatggtaaaacct
tctgaagctgagaagaatcttgttcagtcaacaactgctgctgctggagcaggggggatg
ttgggcccctactccggcggagctagacgtctttatgttggtaacctccacattaacatg
tcagaagatgatctgcgaaaggtttttgaaccatttgggagtgtggagctggtgcaagta
cctcgtgatgaaactggcctctgcaaaggatttggttttgttcagttcgcccgcctggag
gatgctagaaacgcactgaatctaaatgggcagttggagattgcaggtcgtgcaatcaag
gtgtcagctgtaactgatcaaactgaagtcccagaagctggacagacgcaaaccaccggt
gatttggatgatgatgatggaggtggcctgtctctgaatgcacaatcgcgggcgcttctc
atgcaaaagctcgatcgcagtggaactgcatcaagcactggccttactacagctgcatct
attcacggtggagtatctacaatctcttcattggcagctcctgcacttgtacaagggtct
tttcctgctgttgctggactcgcaggggccggcattattcctggtgtaatagacccagtt
ggtgtccccagcgaatgtctgctgcttaaaaacatgtttgatccatctactgagactgaa
gatgattttgacaaggatatagaagaagatgttaaagaagaatgctccaaattcggaaat
ctgaatcatatctatgttgacaagaacagcgttggttttgtctacctgagatttgagaat
gcgcaagcagccataggtgcacaacgtgctctccatggaagatggtttgctggaaagatg
attactgcgacttacatgactacagtggcttacgaggccaaattccccgagagtaaggtc
ggttaa
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