Arabidopsis lyrata (lyrate rockcress): 9322168
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Entry
9322168 CDS
T01578
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9322168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9322168
03051 Proteasome [BR:
aly03051
]
9322168
Membrane trafficking [BR:
aly04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
9322168
Proteasome [BR:
aly03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
9322168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Mod_r
Dsc3_N
CUE
Ubiquitin_5
Rad60-SLD_2
TBK1_ULD
UBA_HOIP
UN_NPL4
Ubiquitin_2
RDM
Motif
Other DBs
NCBI-GeneID:
9322168
NCBI-ProteinID:
XP_020887616
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MGGEADSSQPLTAEGGAGGEAVAVNVRCSNGSKFSVTTSLDSTVESFKELIAQNSDVPAN
QQRLIYKGRILKDDQTLLSYGLQADHTVHMVRGFVPSSPSAPAANAGNQTTAPQAVSSND
SSNLGGGESLFPGLGFNPLGGGNAMAGLFGSGLPDLEQAQQQLAQNPNMIRDMMNTPAIQ
NLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTD
RAMSNIESMPEGFNMLRRMYENVQEPLMNATTMSGNAGSNTGSNPFAALLGNQGVTTQGS
DVSNNTSTPNAETGTPNANPLPNPWGATAGQTTAPGWTNAGGDARSAGLGGLGGLAGLGM
LGADSPLGATPDASQLSQILQNPAMSQMMQSVLSNPQYMNQLMSLNPQLRSMLDMNPQLR
EMMQNPEFLRQFSSPEMMQQMMSLQQSLFSQNRNTAGQDPTQTGAATGTANNGGLDLLMN
MFGSLGAGGLSGTNQPNVPPEERYATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERL
LGSIGQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgaagcagattcaagtcagccgctgactgctgaaggcggagctggaggagaa
gctgttgccgtgaacgtccggtgctccaatggctcgaaatttagtgtgacaacgagtctc
gattccacggtcgagtctttcaaagagttgattgcgcagaacagcgatgtgccagctaat
cagcagcgtttgatttacaagggacgtatcctcaaggacgatcagacgcttctcagctat
ggtttgcaggctgatcacaccgttcatatggttcgaggttttgtaccttcttctccttct
gctcccgctgcaaatgctggaaaccaaaccactgctcctcaagcggttagttcaaatgat
agctcaaacctcggaggaggggaatctttgttccctgggcttggatttaatcctttgggt
ggtggaaatgctatggctggattatttggatctggtcttccggatctggagcaggcacag
caacaactagctcaaaaccctaacatgattagagatatgatgaatactccagccatccag
aatcttatgaacaacccagaatttatgaggagtatgattatgaataaccctcaaatgcgt
gagcttgtggatcgcaatcctgagcttggtcatgtgctcaatgacccaagcatccttcgt
caaactctagaagcggcaagaaacccagagcttatgcgtgaaatgatgcggaataccgat
agggctatgagtaatattgagtctatgcctgaggggtttaacatgcttaggcgtatgtat
gaaaatgttcaggaaccgttaatgaatgctaccactatgtccgggaatgctggaagcaat
acaggctctaatccatttgctgctcttctgggaaaccagggggtcactacacaaggaagc
gacgtctctaataatacttcgacaccgaatgctgaaacgggcacacctaatgcaaatcca
cttcctaatccatggggtgctacggctggccaaacaactgcccctggatggacaaatgct
ggtggggatgcgagaagtgctggacttggtggtcttggtggccttgctggtcttggtatg
ctgggagcggactcacctcttggtgcgactccagatgcttctcagttgagccaaatactg
caaaacccagctatgtcgcagatgatgcaaagtgtactttccaatccacaatacatgaat
cagcttatgagtctcaacccgcaactccgaagcatgctagatatgaatcctcagttgagg
gaaatgatgcagaaccctgaattccttcgccagtttagctctccagagatgatgcagcaa
atgatgtctctacaacaatcacttttctctcagaataggaacacggctggccaggatcca
acgcaaactggtgctgcgacagggacagccaataacggagggctggatttattgatgaat
atgtttggcagtcttggtgctggcggcctgagtggcacaaaccaacccaatgttcctcct
gaagagcgatatgcgactcagttgcagcagttgcaagaaatgggattctacgacagagca
gagaacataagagcgttgcttgcaaccaatggtaacgttaacgctgctgtagaacgactc
ttggggagtattgggcagtag
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