Arabidopsis lyrata (lyrate rockcress): 9322362
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Entry
9322362 CDS
T01578
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9322362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9322362
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
9322362
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_33
AAA_14
AAA_2
AAA_16
TIP49
AAA_22
AAA_18
AAA_17
RNA_helicase
AAA_28
IstB_IS21
NACHT
nSTAND3
NPHP3_N
Rad17
Vps4_C
ABC_tran
AAA_11
Mg_chelatase
Viral_helicase1
NB-ARC
AAA_29
Motif
Other DBs
NCBI-GeneID:
9322362
NCBI-ProteinID:
XP_020887470
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MKKSFEMRKRVIRGSVPVGSFTNLVLESFGKGSTVEEIVDDLRLKHREWARWKRQILLVK
VKNIVNSRSNDRKHEDESRKKQRREQSNSDLCISSSPSPSSGSSSGNVLTSDDNMQFDIT
NDSLRLSYSEKKKASEEASKGSYDVEVKGPTFKDLGGLNGILDKLAFLVKLPLLCPDIVQ
AIGMKPISGFLLHGPPGCGKSTLACAIANETGVPFYMISAAELVSGVSGESEENIRELFF
KAYRTAPSIIFIDEIDAIASKRENQQKGMETRILTQLLSCMDEKYMLLKHKEKNVSSGDP
GFKPGHVVVIGATNRPDALDPALRRSLRFDREICLGVPDQKAREEIFSVATRGLTLDSNF
DRASIASLTSGFVGADFDVLAKEAGMVLAQRIIYSRKSGLCTDIDSLMRQPISEEERKQL
VCTTSDFMEALKEVQPTLTREGFSTKPNVTWDDVGGLDNLKQEFYEHVIRPLKFPEQCKG
FEFCLDTGFLLFGPPGVGKTLVAQAVANEAGANYIHVEGPELLSKYVGDTEKAIRELFSR
ARRCSPCIVFFDEVDALTSKRGEQGAWVVERSLIQLLAELSGGKKRGGVIVIAATNRPDR
MDPAVQRAGRFGRLFYVTLPNAAQRFSILKSLVRGITVPIDPTVDLNAIAERCENCSGAD
LKSLVNRAAFAAYRDTSSTSKRIIKMDHFEQSLSALRPSLTNQQLREYEEICEKFDKAAK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagcttcgagatgaggaaaagagttatccgcgggagcgttcctgttgggagt
tttacgaatctcgttctagaatcatttgggaagggatcaacggtggaagagatcgtagat
gacctccgtttgaagcaccgtgaatgggctcgttggaagcgccagattctgttggtcaaa
gtcaagaatatcgtaaattctaggagcaacgacaggaaacatgaagatgaaagtaggaag
aaacagaggcgagaacagagcaattcggatttatgtatatcatcatcaccttcaccttct
tctgggtcctcatccggcaatgtattgacatcggacgataatatgcagtttgatattact
aatgatagtctacgcctttcttactcggagaagaagaaagctagtgaagaggcaagtaag
ggttcgtatgatgtagaggtaaaaggaccaacctttaaggacttgggtgggttaaatggt
attttagataagctcgcatttctggtgaaactccctctcctatgtcctgacatcgtacaa
gctattggtatgaaacctatttctgggtttttacttcatggtccacctggttgtggcaag
tctacactagcttgtgccatcgccaacgaaactggcgtgcccttttatatgatttccgct
gctgaattggtttctggtgtttccggtgaatctgaagagaatatcagggaactcttcttt
aaagcttataggactgcaccctccattatatttattgatgagattgacgcaattgcatca
aagagggagaatcagcagaaaggtatggagacacgtatcttgactcagttactgagttgt
atggatgagaagtatatgctccttaagcacaaagagaagaacgtttcctctggtgaccct
ggttttaagcctggacatgtagttgtaattggagctaccaacaggcctgacgctcttgat
cctgcgttgaggagatctttgcgattcgaccgggagatctgccttggtgtcccagatcag
aaagccagagaagagattttctctgtggcaacccgcggccttacgctggatagcaatttc
gaccgtgcaagcattgctagtctgacttccggattcgtgggtgctgattttgatgttttg
gccaaggaggctggcatggtgttagctcagagaattatatattctagaaaatcaggactt
tgtaccgacattgattctttgatgaggcaaccaatctcagaggaagagaggaaacaactt
gtctgcactacctcagatttcatggaagctctgaaagaggttcaacctactttaactaga
gaaggattctctactaagcctaatgtaacgtgggatgatgttggtggccttgataattta
aaacaggagttctatgaacatgtaattcgaccattaaaatttcctgaacaatgcaaggga
tttgaattttgtttagacaccggatttttgctctttggaccaccaggggttggtaagacg
ctagttgcgcaggctgttgctaatgaggcaggagccaactatatccacgttgagggtcca
gagcttctaagcaaatatgtgggagacacggaaaaggctataagggagttatttagtcgt
gctaggaggtgctcaccatgcatagtcttctttgatgaggtggatgctttaacatcaaaa
cgtggtgagcaaggtgcttgggttgttgaacgatctttgattcagttactcgctgaattg
agtggtggaaaaaaacgaggaggtgtaattgtgattgctgctacaaacaggcctgacagg
atggaccccgctgttcaaagggcgggcaggtttgggagactattctatgtaacactccca
aatgctgcccaacgtttttcaattctgaaatctctggtgaggggtatcactgttccaatt
gacccaacggttgatttaaatgccatagcggagcgttgtgagaattgtagtggtgctgat
cttaaatcgttggtaaatcgagcggcttttgccgcctacagagatactagctcaaccagt
aagcgcataatcaagatggatcattttgagcaatctttgtctgcactcagaccgtctctc
acaaatcagcaactaagagagtacgaggaaatttgcgaaaagtttgataaagccgccaag
tga
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