KEGG   Arabidopsis lyrata (lyrate rockcress): 9322951
Entry
9322951           CDS       T01578                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC9322951
  KO
K02705  photosystem II CP43 chlorophyll apoprotein
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00195  Photosynthesis
aly01100  Metabolic pathways
Module
aly_M00161  Photosystem II
aly_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:aly00001]
 09100 Metabolism
  09102 Energy metabolism
   00195 Photosynthesis
    9322951
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:aly00194]
    9322951
Photosynthesis proteins [BR:aly00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    9322951
SSDB
Motif
Pfam: PSII Photo_RC PEMT
Other DBs
NCBI-GeneID: 9322951
NCBI-ProteinID: XP_020890199
LinkDB
Position
Unknown
AA seq 815 aa
MNRRIAMTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTT
FVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAF
VALHGAFALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF
GVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFR
AFNPTQAEETYSMVTANSFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNL
RAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNLFN
GTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE
KPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPE
TLEESFPFFGYVWKDRNKMTTILGIHLILLGVGAFLLVFKALYFGGVYDTWAPGGGDVRK
ITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIFGGIWHILTKPFA
WARRALVWSGEAYLSYSLAALSVCGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFL
VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLS
RLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLSTSHFVLGFFLF
VGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgaataggaggatcgctatgactatagcccttggtaaatttaccaaagacgaaaaagat
ttatttgatattatggatgactggttacggagggaccgcttcgtttttgtaggttggtct
ggtctattgctctttccttgtgcctatttcgctttagggggttggttcacaggtacaacc
tttgtaacttcatggtatactcatggattggccagttcctatttagaaggttgcaatttt
ttaaccgctgcagtttctactcctgctaatagtttagcgcattctttgttgttactgtgg
ggtcctgaagcacaaggagattttactcgttggtgtcaattaggtggtctatgggctttt
gttgctctccacggcgctttcgcattaataggttttatgttacgtcaatttgaacttgct
cgatctgttcaattgcgaccttataatgcaatcgcattctctggtcccattgctgttttt
gtttctgtcttcctaatttatccactaggtcaatctggttggttctttgcgcctagtttt
ggtgtagcggctatatttcgattcatcctctttttccaagggtttcataattggacattg
aacccatttcatatgatgggagtcgccggtgtactgggcgcggctctgctatgcgctatt
catggtgctactgtagaaaatactttatttgaagatggtgatggtgcaaatacattccgt
gcttttaacccaactcaagccgaagaaacttattcaatggtcaccgctaacagcttttgg
tcacaaatctttggggttgctttttccaataaacgttggttacatttctttatgttattt
gtaccggtaactggtttatggatgagtgctcttggagtagtcggtctagctttgaaccta
cgtgcctatgacttcgtttcccaggaaatccgtgcagcggaagatccagaatttgagact
ttctatactaaaaatattcttttaaacgaaggtattcgtgcttggatggcggctcaagat
cagcctcatgaaaaccttatattccctgaggaggttctaccacgtggaaacctctttaat
ggaactttagctttagctggtcgtgaccaagaaaccaccggtttcgcttggtgggccggg
aatgcccgacttatcaatttatctggtaaactattgggagctcatgtagcccatgccgga
ttaatcgtattctgggccggagcaatgaacttatttgaagtggcccattttgtacccgaa
aagcccatgtatgaacaaggattaattttacttccccacctagccactttaggatggggg
gtaggtcctgggggagaagttatagacacctttccgtactttgtatctggagtacttcac
ttaatttcttctgcagttttgggctttggcggtatttatcatgcacttctgggacccgaa
actcttgaagaatcttttccctttttcggttatgtatggaaagatagaaataaaatgacc
accattttgggtattcacttaattttgttaggtgtaggtgcctttcttctagtattcaag
gctctctattttgggggcgtatatgatacctgggctccgggagggggggatgtaagaaaa
attacaaacttgactcttagcccaagtgttatatttggttatttactaaaatctcccttt
gggggagaaggatggattgttagtgtggacgatttggaagatataattggagggcatgta
tggttaggttccatttgtatatttggtggaatctggcatatcttaaccaagccttttgca
tgggctcgccgcgcacttgtatggtctggggaggcttacttgtcttatagtttagctgct
ttatctgtttgtggtttcattgcttgttgttttgtctggtttaataataccgcttaccct
agtgagttttacggacctacggggccagaagcttctcaagctcaagcatttacttttcta
gttagagaccaacgtcttggagctaacgtggggtctgctcaaggacctacaggtttaggt
aaatacttaatgcgttctccgactggagaagttatttttggaggagaaacaatgcgcttt
tgggatctgcgtgctccctggttagaacctttaaggggtcctaacggtttggacttgagt
aggttgaaaaaagacatacaaccttggcaagaacgacgttcggcagaatatatgactcat
gctcctttaggttccttaaattctgtagggggcgtagctactgagatcaatgcagtcaat
tatgtctccccgagaagttggttatctacctctcattttgttctaggatttttcctattc
gtgggtcatttatggcacgcgggaagggctcgggcagcggcagcgggatttgaaaaagga
attgatcgtgattttgaacctgttctttccatgactcctcttaactaa

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