KEGG   Arabidopsis lyrata (lyrate rockcress): 9323138
Entry
9323138           CDS       T01578                                 
Name
(RefSeq) cyclin-dependent kinase D-2
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03022  Basal transcription factors
aly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    9323138
  09124 Replication and repair
   03420 Nucleotide excision repair
    9323138
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:aly01001]
    9323138
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aly03021]
    9323138
   03019 Messenger RNA biogenesis [BR:aly03019]
    9323138
   03400 DNA repair and recombination proteins [BR:aly03400]
    9323138
Enzymes [BR:aly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     9323138
    2.7.11.23  [RNA-polymerase]-subunit kinase
     9323138
Protein kinases [BR:aly01001]
 Serine/threonine kinases: CMGC group
  CDK family
   9323138
Transcription machinery [BR:aly03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     9323138
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     9323138
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     9323138
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Kinase-like Haspin_kinase Seadorna_VP7
Other DBs
NCBI-GeneID: 9323138
NCBI-ProteinID: XP_020891405
LinkDB
Position
Unknown
AA seq 348 aa
MSKSNENQPVDRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGNEKEGINFTALRE
IKLLKELNHPHIVELIDAFPHNGSLHLVFEYMQTDLEAVIRDRNIFLSPGDIKSYMLMTL
KGLGYCHKKWVLHRDMKPNNLLIGENGLLKLADFGLARLFGSPNRRFTHQVFATWYRAPE
LLFGSRQYGAGVDVWAAGCIFAELLLRRPFLPGSTEIDQLGKIFQAFGTPVPSQWSDMIY
LPDYMEFSYTPAPPLRTIFPMASDDALDLLAKMFIYDPRQRITIQQALDHRYFSSSPSPT
EPGKLQIPASKGDALEPKASEQNQHANSPAVLSPPGKMRRVMGPEGFT
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtcgaaatccaacgaaaaccaaccagttgatcgttatctccgccgtcaaatcctcgga
gaaggaacatacggtgtcgtttacaaagccacagacacaaagactggaaaaactgtagca
gtgaagaagataagattaggaaacgaaaaggaaggcataaatttcacagctttgagagag
ataaagctattaaaagagctgaatcatccacacattgttgaactcattgatgcttttcct
cacaatggaagtttgcatttagtttttgagtatatgcaaacggatttagaagcagtgatt
cgtgatcgtaatatctttttatcacctggtgatattaagtcttatatgttgatgactttg
aagggtttaggttattgtcataagaaatgggttcttcacagggatatgaagccgaataat
ttgttgattggagagaatggtttgttgaagttggctgattttggtttggcgaggttgttt
gggagtccgaatcggaggtttactcatcaggtatttgctacatggtacagagcgcctgag
ttgttatttggaagtcgacagtatggagcaggagttgatgtttgggctgcaggttgtatc
tttgctgagctattacttcgtcgaccatttctaccgggttctactgagattgatcaactt
ggaaagatctttcaggcttttggaactccagtaccttcgcaatggtctgatatgatctat
ctcccagactacatggagttctcttatacacctgctccaccattacgtaccatttttcct
atggcaagcgatgacgctttggatcttctagcaaaaatgttcatctacgacccacgacaa
aggatcacaatacagcaagctttagaccacaggtatttctcgtcttctccatcaccaact
gagccagggaagcttcagattccggcttcaaaaggagacgcactcgaaccaaaggcctcc
gagcaaaaccaacacgcaaatagcccggccgtactgtcacctcctggtaaaatgaggaga
gtaatgggtcctgagggattcacttga

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