KEGG   Arabidopsis lyrata (lyrate rockcress): 9323208
Entry
9323208           CDS       T01578                                 
Name
(RefSeq) probable pectate lyase 5
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040  Pentose and glucuronate interconversions
aly01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:aly00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    9323208
Enzymes [BR:aly01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     9323208
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 9323208
NCBI-ProteinID: XP_002887143
UniProt: D7KVN7
LinkDB
Position
Unknown
AA seq 408 aa
MRMTLVHLSLSLFSCLLLVLSPTFIASTPVSDPELVVQEVNEKINASRRNLGVLSCGTGN
PIDDCWRCNPKWEKNRQQLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHA
VIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITIQYVTNIIIHGLN
IHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCDDGLIDAIHGST
AITISNNYLTHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN
DYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPQSKWKKWNWRSEGDLFL
NGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgagaatgacacttgttcacttgtctctctccctcttctcatgtctcctccttgtcctt
tctccgaccttcattgcctccactcccgtctccgaccccgaactcgtagttcaagaagtt
aacgaaaagattaatgcgtctaggaggaatctaggcgtgctctcatgtgggaccggaaat
ccaatagacgactgttggagatgcaacccgaaatgggagaaaaaccgacaacagctagcg
gattgcgcgatcgggtttggaaaacacgcaatcggtggccgtgacggtaaaatctacgtg
gtgactgattctagtgacaaagacgtggttaaccctaaacccggaaccctaagacacgca
gtgatccaagacgagccgctatggatcatcttcgcgcgtgacatggtcataaagctaaaa
gaagagctgatcatgaactctttcaagaccatagacggccgtggagcgagcgtccacatt
gctggcggcgcgtgcatcacaatccagtacgtgaccaacatcatcatccacggtctcaac
attcacgactgtaaaaggaaggggaatgcttacgttagagactctccgtcgcattacggg
tggaggacggcgtctgatggtgacgccgtctcgattttcggtggctcccacgtgtgggta
gatcactgctcgttgtcgaactgcgatgacggtctgatcgacgccattcatggatcaacg
gccattacgatctctaataactatttgacgcatcataacaaagttatgcttttgggacac
agtgattcgtacacgagagacaagaacatgcaagtcaccattgcctttaatcactttgga
gaaggtcttgttcaaagaatgccaagatgtagacatggatattttcatgtggtgaataat
gattatacacattggcaaatgtatgcaattggtggaagtgcagctccaacgattaacagt
caaggcaataggtttcttgctccaaacgaccatgtctttaaagaggtgactaaatacgaa
gacgcaccacaaagcaaatggaagaaatggaactggagatcagaaggtgacttgttccta
aacggtgcgttttttacgccttcgggtggaggagcttcttcaagctatgctaaggcttcg
agtttgtcggctagaccgtcctcattagtggcttcggtcacgtccaatgctggtgcactc
ttttgtagaaaaggatctcgatgttaa

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