Arabidopsis lyrata (lyrate rockcress): 9323301
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Entry
9323301 CDS
T01578
Name
(RefSeq) protein argonaute 7
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9323301
03036 Chromosome and associated proteins [BR:
aly03036
]
9323301
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
9323301
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
9323301
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
9323301
microRNA pathway
RISC loading complex
9323301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
P22_AR_C
Motif
Other DBs
NCBI-GeneID:
9323301
NCBI-ProteinID:
XP_020891041
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MEEKTQSHHHHHSSNKNNPNSKSRTPLLHKPCHHHHVQTNPPPFLLHPSSHQNLNLVASN
LPSSYYYYYYCYFYSQFHNSLPPPPPLLPLPPPPLLPLPPPHSMTRFHKSLPVSQVVERK
QQQQQKKKIQVSNNKASGSIAIEEAALVVAKRPDFGGQEGSVIYLLANHFLVKFDSSQRI
YHYNVEISPQPSKEIARMIKQKLVETDVNSFSGVVPAFDGRQNIYSPVEFQGDRLEFFVN
LSIPSCKGVMNYGDLREKQPQKKIDKLFRVNMRLVSKFDGKEQRKEGEDWAPLPPEYIHA
LDVILRENPMEKCTSIGRSFYSSSMGGSKEIGGGAVGLRGFFQSLRQTQQGLALNMDLSI
TAFHESIGVIAYLQKRLEFLKDLSRNKDTELNLEEKREVEKALKNIRIFVCHRETVQRYR
VYGLTEEITDNIWFPDRDGKNLRLMSYFKDHYGYEIQYKNLPCLQISRARPCYLPMELCM
ICEGQKFLGKLSDDQAAKIMKMGCQKPNERKAIIDKVMTGLVGPSSGNQTREFNLEVSRE
MTLLKGRILQPPKLKLDRPRNLKESRAFKGTRIERWALMSIGGSSDQKSTISKFINELTQ
KCEHLGVFLSKNTLSSTFFEPSHILNNISLLESKLKEIQRAASNNLQLIICVMEKKHKGY
GDLKRIAETRIGVVTQCCLYPNITKLSSQFVSNLALKINAKIGGSMTELYNSIPSHIPRL
LRPDEPVIFMGADVTHPHPFDDCSPSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDLD
LMVKELLDDFYKAVNKLPNRIIFFRDGVSETQFKKILQEELQSIKIACSKFQDYNPSITF
AVVQKRHHTRLFRCNPDNENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILW
DENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSESNGGSMN
PSSVSRVGPPKTIPLPKLSDNVKNLMFYC
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaactcagagtcatcatcatcatcacagttccaacaaaaacaaccccaat
tccaaatcaagaacacctcttctccacaagccttgtcatcatcaccatgttcaaaccaat
cctcctccttttcttttgcacccttcttctcaccaaaacctcaatcttgttgcctcaaat
cttccttctagctactactactattactactgctacttctactctcaatttcacaactct
cttcctcctcctcctcctcttcttcctcttcctcctcctcctttacttcctcttcctcct
cctcactcaatgacccgtttccacaaatctctccctgtttctcaagttgtggagagaaag
cagcaacaacagcagaagaagaagatacaagtttctaacaacaaagcgagtgggtccata
gcaatagaagaagcagcattagtggttgctaaaagacctgactttggtggtcaagaaggt
tctgtcatttatctcctcgccaaccattttcttgtcaagtttgattcttcacagaggatt
taccattacaacgttgagatctctcctcagccttcaaaggaaattgctcggatgatcaaa
cagaagcttgtggagaccgatgtgaatagtttctccggtgttgttccggcttttgatggt
aggcaaaacatttatagtcctgtggagtttcagggcgataggcttgagttctttgttaat
ctctctatcccatcttgcaagggtgtaatgaattacggtgacttgcgagagaagcaacct
cagaagaagattgataaactgtttagggttaacatgaggcttgtgtctaagtttgatggt
aaggaacagagaaaggaaggagaagattgggctcctctgcctccagaatacattcatgct
cttgatgttatcttgagggagaatccaatggagaagtgtacgtcgattggaagatcgttt
tactcgagttctatgggtggttccaaggagattggaggaggagctgttggactcagaggg
tttttccagagtcttaggcagactcaacaaggtttagcacttaacatggatctctcaatc
acagctttccatgaaagcattggagtaatagcttacttgcagaagcggctcgagtttctc
aaggacctttctaggaacaaagatacagaattgaatctagaggaaaagagagaagtggag
aaagcacttaagaacataagaatctttgtttgccatagagaaacagttcaaaggtatcgg
gtttacgggttaacagaggagattaccgataatatatggtttccggatagagatgggaag
aacttaaggcttatgagctactttaaagatcattatggttatgagattcagtataagaac
ttaccgtgtctgcaaatcagtagggcaagaccttgctaccttcctatggaactatgtatg
atctgtgaaggtcaaaagtttcttgggaagctttcggatgatcaagctgcaaagatcatg
aaaatgggctgccaaaaaccaaatgaaaggaaagctattattgataaggttatgacagga
ttggtcggtccgtcgagcggaaaccaaacaagagaattcaacctcgaggtttcaagagaa
atgacattgctgaaaggaagaatacttcagcctccaaagcttaaacttgaccggccaagg
aaccttaaagaaagtagagcttttaaaggaacccggatcgagagatgggctttgatgagt
attggaggcagctcggatcagaaatctacaatttccaagttcataaacgagctcactcaa
aagtgtgagcatttgggagtcttcttaagcaagaacacattaagcagcactttctttgaa
ccatcacacatactcaacaacatttcgcttctcgaatcgaaactgaaggagattcaaaga
gcggcgtccaacaatctccagctgattatctgtgtaatggagaaaaaacataaagggtac
ggagatcttaagcgaatagcagagacaagaattggtgttgtgacgcaatgctgcttatac
cctaacatcactaagctcagttctcagttcgtttcaaacttagctctcaagataaacgcc
aagatcggcggatccatgaccgagctctacaactcaataccttctcacatcccaagacta
cttagacccgatgagccggttatcttcatgggagctgatgtaacgcatcctcatccattc
gatgactgtagcccttcagtagcggctgtggtcgggagcataaactggccagaagctaac
agatacgtctcgagaatgagatctcagactcataggcaagagatcattcaagatcttgac
ttgatggtcaaggaacttcttgacgatttctacaaagcggtaaacaagcttccgaatcga
atcatattcttcagagacggtgtgagcgagacacagttcaagaaaatcctccaagaagag
cttcaatccatcaaaatcgcttgctctaagttccaggattacaatccaagcatcacattc
gccgtggtccagaaaagacaccacacaaggctgttccggtgcaatccagacaatgagaac
atccctcctggcacagtggttgatacagtgataactcatccgaaagagtttgatttctat
ctctgtagccacttaggagtaaaaggcacgagcaggccaacgcattaccacatcctatgg
gacgagaacgagtttacttcagacgaattgcagagacttgtgtataacttgtgttacact
ttcgtgaggtgcacgaaacctatttcgattgtaccaccggcttattatgcacaccttgct
gcgtacagaggaaggctctacatcgagagatcatctgaatctaatggaggatccatgaat
ccttcttctgtctctcgagttggtcctccaaagacgattcctctccctaaattaagtgat
aatgtcaagaatctcatgttttactgctga
DBGET
integrated database retrieval system
