Arabidopsis lyrata (lyrate rockcress): 9323484
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Entry
9323484 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9323484
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9323484
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9323484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_13
Motif
Other DBs
NCBI-GeneID:
9323484
NCBI-ProteinID:
XP_002887420
UniProt:
D7KZA5
LinkDB
All DBs
Position
Unknown
AA seq
185 aa
AA seq
DB search
MNSPPENDLCSICHSHFTAPCQANCSHWFCGNCIMQVWRHGSTLQPCKCPLCRRPISLLV
PSEDTIRDRNDSTVADVLGNLETYNRLFGGRSTSLVQRMQDLPFLLRRLLREMMDPQRTL
PLVIRARVYIAMILSAIYIISPIDIIPEGVLGIVGLLDDLLIALIAFLHVAALYRSVLYF
RHAGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtccaccggagaacgatctttgttcgatatgtcattcccacttcaccgctcct
tgtcaagccaattgttctcattggttctgcggaaattgcattatgcaggtttggaggcat
ggatctacattacagccatgtaaatgccctttgtgtcgtcgtcctattagtttgttggtt
ccttcagaggacacaatcagagaccggaatgacagtacagttgcggatgttcttggtaat
cttgaaacgtataaccgactctttggcggccgttcaactagtttagttcagaggatgcaa
gaccttcccttcttactacggaggttgttacgggaaatgatggatccacaaagaacgctt
ccacttgtcattagggctcgggtttatatcgcaatgattctgagtgctatttacataatc
agtccaatagatatcattccagaaggagttttggggatagtcggtttgcttgatgatcta
ctcatagcactgattgctttcctccatgttgctgctttgtaccgctcggttctctatttc
cgtcatgccggttcatga
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integrated database retrieval system
