Arabidopsis lyrata (lyrate rockcress): 9323618
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Entry
9323618 CDS
T01578
Name
(RefSeq) isochorismate synthase 1, chloroplastic
KO
K02552
menaquinone-specific isochorismate synthase [EC:
5.4.4.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00130
Ubiquinone and other terpenoid-quinone biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01240
Biosynthesis of cofactors
Module
aly_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
9323618
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
9323618
Enzymes [BR:
aly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
9323618
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chorismate_bind
Motif
Other DBs
NCBI-GeneID:
9323618
NCBI-ProteinID:
XP_020891734
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MASLQFSSQFLGSNTKKHSSIISISRSYSPTPFTRFSRKKYESCSMSMNGCEGDFRTPLG
TVETRTITAVLSPAAATERLISAVSELKSQPPSFSSGVVRLQVPIDQQIGAIDWLQAQNE
NQPRCFFSRRSDVGRPDLLLDLANENESGNGSVSSDRNLVSVAGIGSAVFFRDLDPFSHD
DWRSIRRFLSSTSPLIRAYGGMRFDPNGKIAVEWEPFGAFYFSVPQVEFNEFGGSSMLAA
TVAWDDELSWTLENAIEALQETMLQVSSVVKKLRNRSLGVSVLSKNHVPTKGAYFPAVEK
ALEMIKQKSSSLNKVVLARNSRIITDTDIDPIAWLAQLQREGHDAYQFCLQPPGAPAFIG
NTPERLFQRNQLGVCSEALAATRPRSASRARDMEIERDLLTSPKDDLEFSIVRENIREKL
NGICDRVVVKPQKTVRKLARVQHLYSQLAGKLTKEDDEFNILATLHPTPAVCGLPAEEAR
LLIKEIESFDRGMYAGPIGFFGGEESEFAVGIRSALVEKGLGALIYAGTGIVAGSDPSSE
WNELDLKISQFTKSIEYEATTSLQAIN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcttcaattttcttctcagtttctgggctcaaacactaaaaaacacagctcc
ataatctccatctctcgtagttactctccaaccccattcactagattctcccgcaagaag
tatgagtcgtgttccatgtctatgaatggttgtgagggagatttcaggacgcctcttggt
acagtggagacaaggactatcactgctgtcttatctccggcagccgccactgaaaggcta
atctccgccgtttctgaactcaaatctcaacctccgtcgttttcctccggcgtcgtccgg
ttacaggtaccaattgaccagcaaatcggagcaatcgattggcttcaagcccagaatgag
aatcagcctcgctgtttcttctctcgtcgcagtgacgttggtcgtcccgatctcctcctc
gatctagctaacgagaacgagagcggaaacgggtcagtgtcttctgatcgtaatctggtt
agcgttgctggtatcgggtctgcagttttcttccgtgaccttgatcccttctctcatgat
gattggagatccatccggaggtttttgtcttcaacttcgcctctgattcgtgcctatggt
ggtatgcgttttgatcctaatggcaagatcgctgtggaatgggaaccttttggtgcattt
tacttttcagtgcctcaggttgagtttaatgagtttggtggaagttcaatgttggctgca
actgttgcttgggatgatgaactctcttggacgttggaaaatgctattgaagcacttcag
gagactatgcttcaggtttcttctgttgtaaagaagttgagaaacagatctctaggagta
tctgttttaagcaagaatcatgttcctaccaaaggggcttatttccctgctgtagagaag
gctttggagatgattaagcaaaaaagttcgtctcttaacaaggttgtgcttgctcgcaac
agcaggattattacggataccgatattgatcccattgcttggctagcacagttacagcgt
gaaggacatgatgcatatcagttctgtcttcaaccacctggtgcaccagcgtttattgga
aacacgcctgagagacttttccaaaggaatcaattaggtgtctgtagtgaagctttggct
gcaactaggcctagatctgcttcaagggcgcgtgatatggagatagagcgtgacttacta
accagtccgaaagacgaccttgagttctctattgtacgagagaatataagagaaaagtta
aacggcatatgtgacagggtcgttgttaagccccaaaaaactgtgaggaagcttgcaaga
gtgcaacacctatattctcaattggcagggaaacttacgaaggaagatgacgagtttaac
atcttggctactctgcatccaactccagctgtttgtgggcttccagcagaagaagcaagg
cttttgattaaggaaatagaatcattcgatagaggaatgtatgcaggacctattgggttt
tttggtggcgaggagagtgaatttgcagtcggaatcagatcagctctagtcgaaaagggt
cttggtgcattgatctatgccgggacagggatagtagcgggaagtgacccatcttcagag
tggaatgagcttgatcttaagatatctcagttcactaagtcaattgaatatgaggcaaca
acatctctgcaggccattaattga
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