Arabidopsis lyrata (lyrate rockcress): 9323652
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Entry
9323652 CDS
T01578
Name
(RefSeq) zinc finger CCCH domain-containing protein 16
KO
K14321
nucleoporin-like protein 2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9323652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9323652
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
9323652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
Torus
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
9323652
NCBI-ProteinID:
XP_020891135
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MRKELCRNFQRGSCRYGENCRFLHPQQAKPNNPFGFGTQQQPQQQQQQQNSSNPFGFGVQ
GGGSSRPNQFQPFENTWSRTASTPTGGGGAAAAQQAGKQTQPADHKCTDPAACKRVMQDD
FKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAMAYEEAKRGIPLQSIVERERNLQNSK
IAEFENFLRNPYKGSVTANQSPFAATTPSIFPPTGQINSSPPGFSGFNQQTAFANTNTGG
LSSSGPPNAFASFNQQSNNQQTTFPNTNAGGVSSSGPPNPFASFNQQSNNQQTAFPNTNA
GGLSSSGPPNASASFNKQPNAFSVNTPQPVPSGPSGFQTHPSTTFKPASFGPGPGLATTP
QNNNIFGPSTSAPAPNTSQNNQAAFNFNVPVASFTAPAVDTTNTSSGTELQIGDPVDSSI
WLKEKWNPGEIPEQAPPDAFV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggaactgtgcagaaattttcagcgtggcagttgtaggtatggggaaaattgt
agatttcttcatccacaacaagctaagccaaataatccctttggctttggtacacaacaa
cagccacaacaacaacagcagcaacagaatagttcgaatccttttggatttggtgtacaa
ggtggtggttccagcagaccgaatcaatttcagccttttgagaatacatggtcaagaacg
gcttctacacctactggtgggggtggtgctgctgctgcgcagcaggctggtaaacagacg
cagccggcagaccataaatgcacagatcctgctgcgtgtaagcgggtaatgcaagacgat
tttaaaaatgagagacccatgtggaagctcacatgctacggccactggaaatattttcca
tgtgatgttacgggtgatatcagctatgaagagctacgtgcaatggcatacgaagaggct
aaacgagggatacctctacagtcgattgttgagagggagaggaatctgcaaaactccaaa
atagctgagtttgaaaactttctgcggaatccatacaaaggctctgttaccgccaatcaa
agcccgtttgctgcaaccactcctagtatcttcccaccgactggtcagatcaattcctct
cctccaggattctctggctttaatcaacaaactgcattcgccaataccaatactggtgga
ctcagttcatctggacctccgaatgcctttgcaagcttcaatcaacaatcaaataatcaa
caaactaccttccccaataccaatgctggtggagtcagttcatctggacctccgaatccc
tttgcaagctttaatcaacaatcgaataatcaacaaactgcattccccaataccaatgct
ggtggtctcagttcatcaggacctccgaatgcctctgcaagctttaataaacaaccaaat
gctttcagcgtcaacactcctcaacctgttccttcaggtccctctggtttccaaacccat
ccatcaacaacattcaaaccagcatcatttggacctggacctggactcgccacaactcca
caaaacaataacatctttggtccatcaacttcagcgccggctcccaacacttcccagaac
aatcaggccgcattcaacttcaatgtccctgttgcatctttcactgctcctgctgtagac
acaacaaatacatcttccggaaccgagctgcaaataggtgatcctgttgatagtagcatc
tggttaaaggagaaatggaatccaggggagataccggagcaagcgccgcctgatgccttt
gtttaa
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